| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4248 |
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| Symbol | |
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| ID | 6285733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 538068 |
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| End bp | 539432 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642618731 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001892772 |
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| Protein GI | 187926427 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.218711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATG CCGCCATGGT TCGCGGTTGG ATGGGCGGAC TCGCGTTGGG CTGCGCCGCC
TTCGTGTCGA GCGCATTTGC CGAGACGGCA CCGACCGGCC AGACGCTTCA TCTGCTGACG
GGAAGCCAGC GCGAGATTCG CCTGGGCAAA CCGCTCGAAC GCATTGCCAT CGGCAACCCC
GAGATTGCCG ATGCCCTGTT GCTCAAGGGG CGAGGTACGG CCACGAGCGT TTTGATCATC
GCCAAGAAGC CGGGTGCGGC CAACGTGATG GTCTGGACGC AAGGCGGCGT TGCGACGACT
TACAACGTGC AGGTGGACGC CGCGGCGCCT GTGCCGGGTG ACCCGGCAGT GGTTGCACAG
GGCGATACGG CGGTTGTTTC AGGTCAGCCC AAGGATGTTT ACGCACTGGC CCGTGCGCGC
CGTTCGGCCG CTGCAGCCAG CGGCGCAGAA AAACCTAAAG ATGGCAACGT CATCGACACC
ACCTCGATGA ACGTGCCAGG TACGGTGCAA GTCGACGTGC GGGTAGTGGA GTTCAGCAAG
ACGGTGCTCA AGGAGGCCGG GTTCACGTTT GGTCGTACGC GCGGCGGTTT CGATTTCCGG
ACATTTGCGC CGTCGTCGCT CTCCAAGGTC ACGTTTGGCT CCAACGGTTT GTCTACCGAA
TCCACCATGC CGATCGGTTC GGCGTTCAAC CTGCTGGTCT CCTCGGTCAG CAAGGGCCTC
TTTGCCGACC TCAGCTTGCT GGAATCAAAC GGCATGGCGC GTGTGCTGGC CGAGCCAAGC
CTGGTTGCCC TGTCAGGCCA GAGCGCCAAT TTCCTGGCCG GTGGCGAGAT TCCGATTCCC
GTGCCCCAAG CGCTGGGTAC CACGACTATC GAATACAAGC CGTTCGGCAT CGGGCTGACG
GTGTCGCCCA CCATTCTCTC GGAGAACCGC ATCGCGCTGA AGGTGGCGCC TGAAGCGAGC
GATCTGGATT TCAGCCGAGG CGTGACGCTC AACGGTGCGA CGGTGCCGGC CATCGTCACG
CGCCGTGCCG ATACAACAGT TGAACTTGGC GATGGCGAGA GCTTTGTCAT CGGCGGGCTG
GTCAGCCGGT CCACGCTGTC CAACGTCGAC AAAGTGCCGT TCCTGGGTGA CGTGCCGATT
ATCGGGACGT TCTTCAAGCG CCTGAACTAC AACCAGGAAG AGCGGGAACT GGTGATCATC
GTCACGCCGC ATCTGGTCAA GCCGATGGCA CGCAATGCGC CGATCGACAA GATGCTGCCG
GGACAGAGTA GCGGGCGGGA TCGCGATACC GCGGGCGATC CCGTGTGGCG GCCGTTCGCG
CTGGGGGTGG CAGATCCGGC CGCCATGCCT GGGTTCTCGA AGTAA
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| Protein sequence | MTDAAMVRGW MGGLALGCAA FVSSAFAETA PTGQTLHLLT GSQREIRLGK PLERIAIGNP
EIADALLLKG RGTATSVLII AKKPGAANVM VWTQGGVATT YNVQVDAAAP VPGDPAVVAQ
GDTAVVSGQP KDVYALARAR RSAAAASGAE KPKDGNVIDT TSMNVPGTVQ VDVRVVEFSK
TVLKEAGFTF GRTRGGFDFR TFAPSSLSKV TFGSNGLSTE STMPIGSAFN LLVSSVSKGL
FADLSLLESN GMARVLAEPS LVALSGQSAN FLAGGEIPIP VPQALGTTTI EYKPFGIGLT
VSPTILSENR IALKVAPEAS DLDFSRGVTL NGATVPAIVT RRADTTVELG DGESFVIGGL
VSRSTLSNVD KVPFLGDVPI IGTFFKRLNY NQEERELVII VTPHLVKPMA RNAPIDKMLP
GQSSGRDRDT AGDPVWRPFA LGVADPAAMP GFSK
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