Gene Rpic_4201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4201 
Symbol 
ID6285632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp482652 
End bp483950 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content69% 
IMG OID642618684 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001892725 
Protein GI187926380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGGCG ACGCCGGTCT TTCCCCCGCT TCCTCTTCCG CATCTGCGCA AACGCTGTCG 
CATGCGCCGT TTTCCTATCC CGCGTTCAGG CTGTTCTGGT TCGCCAGGCT GTCCACCACC
TTCGCGTATC AGATGTTCGG GGTGGCCGTC GGCTGGCAGA TCTACGACCT CACGCGCAGC
GCCTATGTGC TGGGGCTGGT CGGGCTGGCG CAGTTTCTGC CGTCGGTGGT GCTGGTGCTG
GCCTCCGGCC ATATTGCGGA CCGCTACGAC CGGCGGTACG TCGTGCGCGC CTGCCAGGCC
ATCGAAGCCC TGGTGGCGCT CGCGCTGGCC GTCATGGCAG CCAATGGGCA CGCAGGCGTG
CAGCCGATCT TCCTGTGCGT GGTGGTGATT GGCGCGATGC GAGCGTTCGA GACGCCGACG
CTGCAAGCGC TGTTGCCGAC GCTGGTGCCC CTGCAGGCAT TGCCGCGCGC GGTGGCGCTG
TCCAGTTCGG CCGGGCAGAC CGGCGTGATC CTGGGACCGG CGCTGGGCGG CTTTCTCTAC
GTGGCAGGCG CGCCGGTGGT GTATGCCACG GCAGCAGGGC TGTTCTTGCT CGCGCACGTG
TTGCTGGCGC TGGTACGGAT GGAGCGGGCG GCGCCCGTCA GCACGCCGGT CAGCCTCGAA
TCGCTGTTCG CGGGTATTGC GTTCATCAAG GGGCGGCCGG TGGTGCTGGG CGCCATCTCG
CTCGACCTGT TTGCGGTACT GCTGGGCGGC GCGACGGCGC TGCTGCCGAT CTACGCGCGC
GACATCCTTG GCACAGGCGC ATGGGGGCTG GGGCTGCTGC GCTCGGCGCC GGCGGTGGGG
GCGCTGGGCA TGGCGCTTTT CCTGGCGCAC CGTCCGCTGG ATCGGCACGT CGGCCGGGTG
ATGTTTGCCG CCGTGGCGGT GTTCGGGCTG GCGACGCTGG TATTTGGGGT GTCGCACTGG
CTGCCGCTGT CGATGCTGGC GCTGGTGCTG CTGGGGGCGT CCGACATGAT CAGTGTGGTG
ATCCGCACTT CGCTGGTGCA GCTCGATACG CCCGATGCCA TGCGCGGGCG CGTGAGCGCA
GTCAATTCCG TGTTCGTGGG CGCGTCCAAC CAGTTGGGCG AATTCGAATC GGGCATGCTG
GCGGGGCTGC TTGGGCCGGT GGCCTCGGTG GTGATTGGCG GCCTCGGCAC GCTGTTGGTG
GTGGCAGCCT GGATGCGGCT GTTCCCGGCC CTGGCGCAAC GCGACCGCAT GCGCGATCCG
CACCCGGCGG ATGCCGGACA CCCCTCTTCA GGGGGATAA
 
Protein sequence
MSGDAGLSPA SSSASAQTLS HAPFSYPAFR LFWFARLSTT FAYQMFGVAV GWQIYDLTRS 
AYVLGLVGLA QFLPSVVLVL ASGHIADRYD RRYVVRACQA IEALVALALA VMAANGHAGV
QPIFLCVVVI GAMRAFETPT LQALLPTLVP LQALPRAVAL SSSAGQTGVI LGPALGGFLY
VAGAPVVYAT AAGLFLLAHV LLALVRMERA APVSTPVSLE SLFAGIAFIK GRPVVLGAIS
LDLFAVLLGG ATALLPIYAR DILGTGAWGL GLLRSAPAVG ALGMALFLAH RPLDRHVGRV
MFAAVAVFGL ATLVFGVSHW LPLSMLALVL LGASDMISVV IRTSLVQLDT PDAMRGRVSA
VNSVFVGASN QLGEFESGML AGLLGPVASV VIGGLGTLLV VAAWMRLFPA LAQRDRMRDP
HPADAGHPSS GG