Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4154 |
Symbol | |
ID | 6285568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 421438 |
End bp | 423018 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618639 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_001892680 |
Protein GI | 187926335 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.326396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCCC GCCCGAGCAT TGAACCGCCC AAGCCAGACA CGCCTACTGC GCCCATCGCG TCGGCATCCA GCCCGCTGGA TGCGCTACCC GTGCCTGAAA TTCCGGTGAT GGCAGTGATG GGCGGGCTGA TGCTCGCCAT CTTGCTGGGC GCGCTGGAGC AAACCATCGT TGCGGTGGCC TTGCCCGTGA TCGCGGGCGA ATTCAACGGC TTTGCGCTGA TGGCCTGGTT GGTGTCGGCG TATCTGGTGG CGTCCACGGT GGTGACGCCC ATCTACGGCA AATTGAGTGA CCTCTACGGC CGCCGCGCCA TGCTGACGAC GGCCATCGTG CTGTTCGTGC TGGCGTCGGT GGCGTGTGCG GTGGCGACCA GCATGCCGAT GCTGTTGTTT GCACGCGTGC TGCAGGGGCT GGGCGGCGGC GGTCTGATCT CGGTATCGCA GGCCACGATC GCCGATGTGG TGCCGCTGCG CGAGCGTGGC CGCTACCAGG GCTACGTGAG CGGCATGTGG GCCATGGCCA GCCTCGCCGG ACCGGTGATC GGTGGCTATC TGACGCATTA CCTCTCGTGG CGCTGGATTT TCTGGATCAA CCTGCCCCTG GGCATCGTCG CGCTGTTCGT CGTGCGCCGC ACGCTTCGGC ATCTGCCGGT GGCGCATCAG CGCCGCCCCA TCGACGTGCC CGGCGTGGTG CTGTTTGCCG GAGGCCTGAC AGCGCTGTTG CTGATGATCA CCCGCGTGGG GCAGGGCACG CCGCTCACGC AGCCCGAAAA CCTTGGCCTG CTGGCGGCGG CGGTGGTGCT GCTGGGCGCG TTTGTCTGGC AAGAGAACCG CGCCGTCGAG CCGATCATTC CGCTGTCGAT GTTCCGGGTC CGTACCGTCA CGATCTGCTG CCTGGCGCTG TTCCTGTGCT TCTTCCAGCT GATCGCCACG TCGGTGCTGA TGCCCCTGCG CTTCCAGATG GTGGCGGGTG CCAGCCCCGA TGCCGCCGCG CTGCGCCTCG TGCCGCTCAC GCTGTCGATT CCGCTTGGCG CCTTCATTGC CGGCAAATGG ATGACGCACA GCGGTCGCTA CAAGCCCCTG ATGCTGGGTG GCGCATGCGT GGTGCCGTTT GCCGTGGCAT CGCTGGGTCT GCTGGACCCG CACAGCGTGT TGGCGCTGAC CCTGGCGATG ATCGTGCTTG GCCTGTCGAT TGGCGTGCAG TTCCCGACCG GCCTGGTGGC CACGCAAAAT GCGGTGTCGC CGCAGACGGT GGGTCTGGCC ACGGCACTGA CCGCCTTCTC GCGCCTGCTG GGTGGCGCGG TGGGTGTGGC GGTGCTGACG TCCGTGCTGA TTGCGCTGCT GCGTCAGGCT GCGCCCGAAG CGCAGGTAGC GGCCGGTGGC GACGTGCTGA TGGACCTTTT CCATGCCGCG CTTGCCAGCA GCGGTGCCGA TGCCCAGGCC CTGCAGCGCG CAGGCGAGAG CGCGTTCCGG CATCTGTTCT TCTTTGCCGC TGCGGTGTCG GTTATTTCGC CGCTGTTGGT CATGCGGCTG GAAGAGAAGG CGCTGCGCGG CAAGGTGTCG CTTGCCGAGG CTGTCGAGTA A
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Protein sequence | MSSRPSIEPP KPDTPTAPIA SASSPLDALP VPEIPVMAVM GGLMLAILLG ALEQTIVAVA LPVIAGEFNG FALMAWLVSA YLVASTVVTP IYGKLSDLYG RRAMLTTAIV LFVLASVACA VATSMPMLLF ARVLQGLGGG GLISVSQATI ADVVPLRERG RYQGYVSGMW AMASLAGPVI GGYLTHYLSW RWIFWINLPL GIVALFVVRR TLRHLPVAHQ RRPIDVPGVV LFAGGLTALL LMITRVGQGT PLTQPENLGL LAAAVVLLGA FVWQENRAVE PIIPLSMFRV RTVTICCLAL FLCFFQLIAT SVLMPLRFQM VAGASPDAAA LRLVPLTLSI PLGAFIAGKW MTHSGRYKPL MLGGACVVPF AVASLGLLDP HSVLALTLAM IVLGLSIGVQ FPTGLVATQN AVSPQTVGLA TALTAFSRLL GGAVGVAVLT SVLIALLRQA APEAQVAAGG DVLMDLFHAA LASSGADAQA LQRAGESAFR HLFFFAAAVS VISPLLVMRL EEKALRGKVS LAEAVE
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