Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4089 |
Symbol | |
ID | 6285458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 362801 |
End bp | 363787 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618578 |
Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
Protein accession | YP_001892619 |
Protein GI | 187926274 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.230626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCC ATCCGCCCCA CACCGCCCCA TCTGGCCGCC GACGCTGGCT GGCCGCATTG CTTGGCGCCG GCATGGCGCT GTGCGCAGGC CTGACGCAGG CCGCCGAGCC GACCACGGTG CGTATCGGCT TTCAGAAAGC CGGACTGCTG GCGGTGCTGA AAGCGCAAGG CGCGCTCGAC AAACCGCTGG CCGAGCTTGG CTACAAGGTG GAATGGAAGG AATTCCCTGC CGGGCCTCAA CTGCTGGAGG CGCTCAACAC CGGCAGCATT GAGTTCGGCT ACACCGGCGC GCCGCCGGCT GTGTTTGCGC AGGCCGCAGG CGCACGCCTT GTCTATGTGG GGGCCGAGCC GGGCGGCAAG ACCAACGAGG CGCTGTTCGT GCTCGACAGC TCACCCGCGC ACAGCGTGGC TGACCTGAAA GGCAAGCGCA TCGCGCTGCA AAAGGGCTCC AGCTCCAACT ACCTGCTGGT GCAGCTGCTT CGTCGCGCCA ACCTCACGGT GCAGGATATT CAGCCGATCT ACCTGCCACC GGCCGAGGCG CGCGCAGCCT TCGAGAGCGG CGCGGTCGAT GCGTGGGTCG TGTGGGATCC GTATTACGCG CTGGCACAGA AGGCGTTGAA GACACGCACG CTGGGCGATT TCAGCGAGCT GCCGGTGTTC AACTTCTACG AAGCCACGCC GGAATTCGTG AACACGCATC CGCGCGCGGT CAATGCCATC CTGGCCCAGT TGCGCACGGC GGGGCTGTGG GTGAATCAGC ATCCGCAGGA AACCGCCGCC CTGCTGGCGC CCAAACTCGG CATCGAGCAG CCCGTTGTCG AGACCTGGTT GCGGCGCGTG CCCTACGGCG TCACGCCGGT CACGCCGCAG ATCGTGGCCT CGCAGCAGCA GATTGCCGAC CTGTTCCTGC AGCAGAAGCT GATTCCGAAA CCGGTGAACG TACAAAGCGC TGTCTGGCAG GCGAATTTTC CGGTAGCGGG ATTGTGA
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Protein sequence | MQSHPPHTAP SGRRRWLAAL LGAGMALCAG LTQAAEPTTV RIGFQKAGLL AVLKAQGALD KPLAELGYKV EWKEFPAGPQ LLEALNTGSI EFGYTGAPPA VFAQAAGARL VYVGAEPGGK TNEALFVLDS SPAHSVADLK GKRIALQKGS SSNYLLVQLL RRANLTVQDI QPIYLPPAEA RAAFESGAVD AWVVWDPYYA LAQKALKTRT LGDFSELPVF NFYEATPEFV NTHPRAVNAI LAQLRTAGLW VNQHPQETAA LLAPKLGIEQ PVVETWLRRV PYGVTPVTPQ IVASQQQIAD LFLQQKLIPK PVNVQSAVWQ ANFPVAGL
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