| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3997 |
|---|
| Symbol | |
|---|
| ID | 6285277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 268632 |
|---|
| End bp | 269558 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642618488 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_001892529 |
|---|
| Protein GI | 187926184 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.686656 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACGG ACGAAGAATT GGCACTCCTG GAGGCTATCC GCCAGACGGG CAGCCTGTCG
CGCGCGGCGG CGCAACTGGG CAAGGCGCCG TCGACCGTGT CATATGCCGC ACGCCAACTG
GAGCAGCGCT TCGACGCCCT GCTGTTTGAT CGCCGTCGCT ACCGGCTGCA GCTCACGCGC
GCCGGGCAGT TGCTGACGGA AGAAGCCGCG CGGCTGGCGC AGGATGTGTC GCGTGTTACG
CAGCGCGTGC GGCAGGTGGC CAACGGCTGG GAAGACCGCT TGTGGATCGT GACGGACGAG
CTGCTGGAGT TCGAATCGCT CATGGCAGTG ATGCACGCGT TCGATGCGCT GCAATCGGGC
GTGGCGCTGC GCGTGACGCA CGAAGTGCTG GCCGGCACCT GGGAGGCCCT GCGCGACGGC
CGCGCCGATC TCGTGATCGG GGCGACCAAC GAGCCGCCTT CCATCCCGAA CCTCGGATGG
TTCGAGCTGG GGGTGGTGGA ATGGGTATTT GCCGTGTCGC CACGACACCC GCTTGCAGCC
GTCGACGCGC CGCTCACGCG CGAGGAAATC GCCCGGCATC GCGCCGTGGT GGTGGCCGAT
TCGGCGCGCA CCACCGCCGG CCGCGCCTAT GGGATGCTGA GCGGGCAGCC TACGCTGGCC
GTGCCCAGCA TGCGTGCCAA GACGCTTGCC CAGCGCGACG GCCTGGGCGT CGGCTGGCTG
CCGAGGCACC GCGTGGCGTC GCTGCTGGCG CGCGGCGAGC TGGTGGAAAA ACGTACCACC
GATCCGCGCG AGCCGAACCT GCTCTACGTC GGCTGGCGCA GCGGCGATGT CGACGGCGAG
GGCCGCGCAC TCCAATGGTG GCTTGAGCAG CTACGGCAGC CCCGCTTGGC CAGGCGGCTG
GTGCAGGGCA TCGACACATT CGCCTGA
|
|---|
| Protein sequence | MLTDEELALL EAIRQTGSLS RAAAQLGKAP STVSYAARQL EQRFDALLFD RRRYRLQLTR
AGQLLTEEAA RLAQDVSRVT QRVRQVANGW EDRLWIVTDE LLEFESLMAV MHAFDALQSG
VALRVTHEVL AGTWEALRDG RADLVIGATN EPPSIPNLGW FELGVVEWVF AVSPRHPLAA
VDAPLTREEI ARHRAVVVAD SARTTAGRAY GMLSGQPTLA VPSMRAKTLA QRDGLGVGWL
PRHRVASLLA RGELVEKRTT DPREPNLLYV GWRSGDVDGE GRALQWWLEQ LRQPRLARRL
VQGIDTFA
|
|---|
| |