| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3972 |
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| Symbol | |
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| ID | 6285227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 234815 |
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| End bp | 235831 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642618463 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001892504 |
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| Protein GI | 187926159 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.184414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGA AAAACAACGA GAAAGGAACC GTCTCTGTCA GCCTCGTCAA CGAGGCCGTG
ACGCGCGCCC GCGCGCATGG CGTGGACATG CAGCCCATCA TGGCCGCTGC GGGCATCACG
CCGCAGATGC TGGCGCAGCC GCGCAGCCGC GTGTCGTCCG CACAGTACGG TGCGCTGTGG
GCCGGTATTG CGCAGGCCAT GGACGATGAG TTCTTCGGAC AGGATGCGCA CCCCATGCGC
TGGGGCAGCT TCGTGACGAT GACGCAGGCG GCGCTCACGG CGCGCACCGG CCGGCAGGCG
CTTGCACGGG CCACGGGTTT TTTGCGGCTG GTTCTGGATG ACCTGCATGT ACGCGTTGAA
GAAGACGATC AGCGTGTGCG TCTCGTGTTC GTGCACCGCA AGGGCACGCG TGTGCCGCCC
ATGTTCACCT ACGCCACGTG GCTCATCATG GTCTACGGGC TGGTGTGCTG GCTCGTGGGG
CGGCGCATTC CCTTCATTGC CGCGCGCTTC CGGTGCGCCG CGCCGCAGGA TGCGCAGGAA
TATCGCCTGA TGTTTTGCGA CGACATGGCG TTCAAGCACG ATGCGTCGTA CGTCGACCTA
TCGCCCACCT TTCTCGACCT GCCGGTCATT CAGACGGCCG CGTCCATCAA GACGTTCCTG
CGCGATGCGC CGGGCAGCTT CATCGTCAAG TACCGCAACC CGGATTCCTT CGCCGCGCGC
GTGCGCAAGA CGCTGCGCAA TCTGCCCGTG GCCAGTTGGC CCGCGTCGGA CGCAATGGCG
CTCAAACTGA ACGTGGCCGA GGCCACCATG CGGCGGCGCC TGAAGCTGGA AGGCCACACG
TATCAGTCGA TCAAGGACGA CCTGCGGCGC GACATTGCCA TCGGCCAGTT GCAGGACACG
CGCCGCACCA TCGCCGACAT TGCCGTCGCG GTCGGCTTTG CGGAACCGAG CGCCTTTCAC
CGCGCCTTCC GCAAATGGAC AGGCATGCGG CCAACGGACT ATCGGACGGA GCGCTAG
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| Protein sequence | MPMKNNEKGT VSVSLVNEAV TRARAHGVDM QPIMAAAGIT PQMLAQPRSR VSSAQYGALW
AGIAQAMDDE FFGQDAHPMR WGSFVTMTQA ALTARTGRQA LARATGFLRL VLDDLHVRVE
EDDQRVRLVF VHRKGTRVPP MFTYATWLIM VYGLVCWLVG RRIPFIAARF RCAAPQDAQE
YRLMFCDDMA FKHDASYVDL SPTFLDLPVI QTAASIKTFL RDAPGSFIVK YRNPDSFAAR
VRKTLRNLPV ASWPASDAMA LKLNVAEATM RRRLKLEGHT YQSIKDDLRR DIAIGQLQDT
RRTIADIAVA VGFAEPSAFH RAFRKWTGMR PTDYRTER
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