Gene Rpic_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3970 
Symbol 
ID6285224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp233728 
End bp234309 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content64% 
IMG OID642618461 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_001892502 
Protein GI187926157 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.169391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATC CCATCACGCC AGCCCCGGTA GAACTGGCGA AGTGCTACCG CCTCCTGAAC 
CACGGCCCGA CCACGCTGGT CACCTCCGCC CACAACGGCG TGCGCAACGT CATGGCTGCC
GCCTGGGCGA TGCCGCTCGA CTTTGACCCA CCCAAGGTGC TGGTCGTGGT CGACAGCCGC
ACACTCACAC GTGAGTTGAT CGAAGGCTCG GGCGTGTTTG CACTCAACAT TCCCACCCGC
GCGATTGCCG AGACCACGCT GACGGTCGGC ACACTCTCGG GCCGCGATGT CGACAAGTTC
GATGCCCTGG GCCTCGTCAC CATGCCCGCC CGTACGATCG ACGTGCCGCT GGTGGCAGGT
TGTGCAGGGT GGCTCGAATG CCGCGTCATT CCGGAGCCGC ACAACGAGAA GCGCTACGAC
CTCTTCATCG CAGAAGTGAC CGCCGCCTGG GCCAATCCTG CGCTGTTCAG CAACGGTCGC
TGGCACTTTA CGGATGCTGG CAGCAAGACC CTGCACTACC TCGCGGGCGG TGCATTCTTT
GAGACCGGCG AAGCGTTCAC CGTCGAGGTG AAACAGCTAT GA
 
Protein sequence
MPNPITPAPV ELAKCYRLLN HGPTTLVTSA HNGVRNVMAA AWAMPLDFDP PKVLVVVDSR 
TLTRELIEGS GVFALNIPTR AIAETTLTVG TLSGRDVDKF DALGLVTMPA RTIDVPLVAG
CAGWLECRVI PEPHNEKRYD LFIAEVTAAW ANPALFSNGR WHFTDAGSKT LHYLAGGAFF
ETGEAFTVEV KQL