Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3933 |
Symbol | |
ID | 6285115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 178027 |
End bp | 180849 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642618424 |
Product | malto-oligosyltrehalose synthase |
Protein accession | YP_001892465 |
Protein GI | 187926120 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3280] Maltooligosyl trehalose synthase |
TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.734301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC TGACCACACC CCCCGCACCC GTCACCCTCC AACGTGTGCC GCGCGCCACG GTGCGGCTGC AACTGCACCG CGACTTTACG TTCGACCATG CGCGCGCGTT GCTGGATGAC TTCGCCGCGC TCGGCATCTC GCACCTCTAC ACGTCGCCCA TCACCACGGC GCAACCGGGC TCCACGCATG GCTATGACGT CGTCGACCCC ACACACGTGA ACCCCGAGCT GGGCGGCGAA CGCGCGCTCG AACAGTTGGT GGATGCGCTG CATGCGCGCG GCATGGGGCT CGTCGTCGAT ATCGTGCCAA ACCACATGGG CGTGGGGGGC GCGCACAACA CGTGGTGGTT GGACGTGCTC GAATCCGGCC CCGAGAGCAC CTACGCCAAC TTCTTCGATA TCGACTGGCA ACCGCCCAAC CCGGCCCTGC GCAACAAGGT GCTCGCGCCC TTCCTTGGCG AAAACTACGC CGACGCGCTG GCCGGCGGCC GACTGCAGCT GACCTACGAC GACACGGCTG CGCGCCTGGC GATTGCGTAC TACGATCACC GGTTCCCGAT TGCGCTGGCC GACTATGCCG CGTTGCTTCG CGCGGGCAAC GCTGACACCG CCACCCACGC GGTGGCCGAC CGCTTTGCCG CGCTCGGCAC GATCCGCTCA CTGCGCACGC GCCGCGAACG TGCCGACGAA GCACGCGACG CGCTGCGCAA CCTCGCCACC ACGGAAGCCG GCGCCGCACA CATCGCAGAA GCCGTGCGCA CGCTCAATGC GCAACCCGAT CAACTCGATG CGCTGATGGC GCGCCAGCAC TGGCGCCTTG CCCATTGGTG CACCGCCAAT GATGAGATCA ACTGGCGCCG CTTCTTCGAT ATCGGCTCGC TGGCCGGCCT GCGCATGGAG CGCGCCGAAG TCTTTGAAGC CACGCACGCG CTGCTGTTCC GGCTCTATCG CCTGGGCTGG ATTGACGGCG TGCGCATCGA CCACGTTGAT GGCCTGGCCG ATCCTGCCGC CTACTGCCGC CAGCTACGCC GCCGTCTGCA AGACGAGCAT GCCGCACGCC CCGCCGACCG GCTCACGAAC CACCCGTGGA TCGTCGTCGA AAAGATCCTC GCCAGCGATG AACCCATGCG CACCGACTGG GGCGTCGACG GCACCAGCGG CTACGACTTC ATGAACCAGG TGGGCGCACT GTTGCACGAC GCGCACGGCG AGACCGCCCT CACCCAGGGC TGGCTGGAGT GGATCGGCGC ACCGGTGGCT GACGCGCCGT TCTCCGCGAC GACTGCGCCC GCACGCCGCC AGATCCTGCA TGTGCACTTT GCGGCGGAAC TCGATTCAGC CACGTCGGCG CTGCACGCGG TGGCGCAGCA GAACCACAGC AGCCACGACG TGACGTGGCA CGCCATCCGC CGCGCACTGG CCGAGGTGAT CGTCCACTTT CCGGTGTATC GCACCTATGC GAATGCGCAA CAACGCGACG CACAGGATTC GGCCATCCTG CAAACCGCCA TGTCGCGGGC GGCGACCTGC CTGCGGCGCG TCGATCAGCC TGTGCTCGGC TGGCTCGATG CTTGGCTGGG CGGGCAACCG GCCGGGCAGG ACAAACTGCG CCAACTGGCC TTGCGGCGGT GCCAGCAGTT ATCGTCGCCG GTGGCGGCCA AGGCGGTGGA AGACACGGCG TGCTACCGAT ACGGGCGGCT GCTGTCGCGC AACGAGGTCG GCGCGAATCC GGGCGAGTTT TCCATGAGCG CCAACGCGTT CCATCACGCC ATGCAAGCGC GCGCCCACAC GTGGCCTCAC GCGATGCTCA CCACCGCCAC GCACGACCAC AAGCGCGGCG AAGACGTGCG CGCGCGATTG GCCGTGCTGT CTGAGCGTCC GACGCAGTGG CTGGCCGCCG CACACCAATG GCGTGCGGAA CACGCTGCGT GGGTGCAAAA ACTGCCTGCC GGCCCCGCGC CCTCGCCCGC CGCGCAGTGG ATGCTGTATC AAACGCTGGT GGGCATCTGG CCGGCGGACC TCGACTGGCA TGACGCCGAT GCCGTGCGCG AGTTGGCCGA GCGCGTCGCA CAGTGGCAGG AAAAGGCGCA GCGCGAAGCC AAGCTGCGCA CTGACTGGTT CGCGCCCGAT GCGGACTACG AAGCCGCCAG CCGCAATTTC GTCTTCACGC TGCTGACAGG CGAAGCGGCC CCGACCTTCC TGCCTTCGCT CTGCGCTTTC GTGCAAAGCG TGGCGCCCGC CGCGGCCATC AACGGCCTCG TGCAGACCTT GCTGCGCACC ACGCTGCCCG GCGTGCCCGA CCTCTATCAG GGCGCCGATT TCTGGGACAC CAGCCTCGTT GATCCCGACA ACCGCCGGCC CGTCGACTAC GCCGCTCGGC ACCGCGCATT GCGGGCATTG CACTTGCATG CGGGCCATGG CCTCGCGTCA CTGCTCGCGC ATTGGACCGA CGGCCGCATC AAGCAAGCCG TACTGGCACG TGCACTGGCC CTGCGTGCCG CGCTGCCAGC GGTGTTCGAA TCCGGCGATT ACCAACCGCT GGCCGTGACC GGCAGCGGCG CACAGCACGT GTTGGCGTTT GCGCGTGTGC ATGGCGCCAA CGCGATCATC GTGATCGTGC CGCTGCATGC CTCCGCACTG CTGGGCCATG CCCCCGCACC AACGTTCGCG GATGGTGCTT GGCGGGACAC CACGGTCTGT TTGCCGTCCA CGCTCTCGCA TCTTCCCCTG CATAACGCAT TCGACGGCCA GACACTGCAC AGCCCGCGCC TGGCGTTGGG CCAGGTGCTG GCGCACTTGC CGGTCGCCCT GCTGCATACC TGA
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Protein sequence | MSELTTPPAP VTLQRVPRAT VRLQLHRDFT FDHARALLDD FAALGISHLY TSPITTAQPG STHGYDVVDP THVNPELGGE RALEQLVDAL HARGMGLVVD IVPNHMGVGG AHNTWWLDVL ESGPESTYAN FFDIDWQPPN PALRNKVLAP FLGENYADAL AGGRLQLTYD DTAARLAIAY YDHRFPIALA DYAALLRAGN ADTATHAVAD RFAALGTIRS LRTRRERADE ARDALRNLAT TEAGAAHIAE AVRTLNAQPD QLDALMARQH WRLAHWCTAN DEINWRRFFD IGSLAGLRME RAEVFEATHA LLFRLYRLGW IDGVRIDHVD GLADPAAYCR QLRRRLQDEH AARPADRLTN HPWIVVEKIL ASDEPMRTDW GVDGTSGYDF MNQVGALLHD AHGETALTQG WLEWIGAPVA DAPFSATTAP ARRQILHVHF AAELDSATSA LHAVAQQNHS SHDVTWHAIR RALAEVIVHF PVYRTYANAQ QRDAQDSAIL QTAMSRAATC LRRVDQPVLG WLDAWLGGQP AGQDKLRQLA LRRCQQLSSP VAAKAVEDTA CYRYGRLLSR NEVGANPGEF SMSANAFHHA MQARAHTWPH AMLTTATHDH KRGEDVRARL AVLSERPTQW LAAAHQWRAE HAAWVQKLPA GPAPSPAAQW MLYQTLVGIW PADLDWHDAD AVRELAERVA QWQEKAQREA KLRTDWFAPD ADYEAASRNF VFTLLTGEAA PTFLPSLCAF VQSVAPAAAI NGLVQTLLRT TLPGVPDLYQ GADFWDTSLV DPDNRRPVDY AARHRALRAL HLHAGHGLAS LLAHWTDGRI KQAVLARALA LRAALPAVFE SGDYQPLAVT GSGAQHVLAF ARVHGANAII VIVPLHASAL LGHAPAPTFA DGAWRDTTVC LPSTLSHLPL HNAFDGQTLH SPRLALGQVL AHLPVALLHT
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