Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3919 |
Symbol | |
ID | 6285086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 162436 |
End bp | 163962 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618412 |
Product | Carotenoid oxygenase |
Protein accession | YP_001892453 |
Protein GI | 187926108 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCC GATCCTTCAT TGCGGCCCTG GGCGCCGCAC CGTTTGGCTT GACCCTGACC GATGTAATGG CCGCCACCCC GGACCCATGG GCTGCGGGGT TTGCAGCGGC GCGCGCGCAG TATCCGTGGC TGGCGGGCTA CCAGGGCGTC AGCGCCGACA TGCCGACTCG CGCGCTGAAG GTGGAAGGCA GGTTCCCGCC CGCGTTGCAC GGCGCGTTCT ACCGAAATGG CCCCGCGCGG CATGAGATCG GCGGCGTGCG TTATCACCAC CTGTTTGATG GCGACGGCAT GATCCAGCGC TACGACATCA GCGAGCAGGG CGTAACGCAC CGCGGCGTGT TCGTGCGCAC TGACAAGTTT GTCGCCGACA CCGCCGCCGG CCGGCCGTTG CGCGCGACGT TCGGCACCGC CAACCCCGAC ATGGAGCCGG TCGCTTCGCC CGACAGCATC AATGTGGCCA ACACCAGCCT GGTGATGCAT GGCGACGAGA TGCTCGCGCT GTGGGAAGGT GGCTCGGCCA CGCGTGTCGA TCCGGATTCT CTGCGTACGC TGGGAGTGCA GACCTGGCGC GACGACTACA AGGGCATGCC GTTCTCCGCC CACCCCAAGG TCGAGCCCGA CGGCACGCTG TGGAATTTTG GCGTGAGCAG CGCGGCTGGT CTGCTGACTG TCTACTGCGT GGGCGCGGAC GCTGCGCTCA AGCGTGTGGA ATCGGTCAAC GTTCCGGACG TGGCGATGGT GCATGACTTT GCCGTGACGC AGCGCCACCT GGTGTTTCTG CTGCCTCCGT TCGTGTACGA CGTTGAACGC TCGCACGCCG GCATGTCGTT TCTCGATTCC CATGTCTGGC GGCCGGAGCT GGGCATGCGC GTGCTGGTGC TGGATAAGGA CGACATCACG CGCATGCGCT GGCTGAAGTT GCCGGAGGGC TTTGTGTTCC ACCTGGGCAA TGCTTGGTCG TCGCCGGATG GGCAGGAGAT CCACCTCGAT TACCTTCGCT CGGACGATGC CTCGGTCGTC ATCACGTCGC TGCGTGAATT GATGCGTGGG CAGATTCGCC CGTCGCCGGG CGCGCGCCTC ACGCAAGTGC AACTGAACCT GCGAACAGGT CGGGCTGAGC AGTTCAGCAC CGCGCATGTG GCCGAATTCC CGAAGATCGA CACGCGGCGC ACCGCGCAGC GTCATCGTGC GCTGTTCATG GTGGCCCACA CGGCGCCATT GTCGAATGGA AGCCCGCACG CGCTGCACGG CTTCGACACG GTCATGCGCG TCGATACGGA TTCAGGGCAG GCCGAGCAAT ACCGCTTCGG GCACCGCACG CTGGTGGAAG AACACGTGTT CGTGCCGGCA TCGGCCAGCG CCCGTGAAGG CGAGGGCTGG TTGATCGGTA CGGTGTTCGA TGTGGATGCC GGCTGTACGA GGCTGACGGC GTTCGATGCA CAGCATGTTG CCGCAGGGCC CGTCGCCACG GCAAGCCTGA ACGGCGTGGC GCCGCTCGGC CTGCATGGAT TGTTTCGCGC GGCTTAA
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Protein sequence | MQRRSFIAAL GAAPFGLTLT DVMAATPDPW AAGFAAARAQ YPWLAGYQGV SADMPTRALK VEGRFPPALH GAFYRNGPAR HEIGGVRYHH LFDGDGMIQR YDISEQGVTH RGVFVRTDKF VADTAAGRPL RATFGTANPD MEPVASPDSI NVANTSLVMH GDEMLALWEG GSATRVDPDS LRTLGVQTWR DDYKGMPFSA HPKVEPDGTL WNFGVSSAAG LLTVYCVGAD AALKRVESVN VPDVAMVHDF AVTQRHLVFL LPPFVYDVER SHAGMSFLDS HVWRPELGMR VLVLDKDDIT RMRWLKLPEG FVFHLGNAWS SPDGQEIHLD YLRSDDASVV ITSLRELMRG QIRPSPGARL TQVQLNLRTG RAEQFSTAHV AEFPKIDTRR TAQRHRALFM VAHTAPLSNG SPHALHGFDT VMRVDTDSGQ AEQYRFGHRT LVEEHVFVPA SASAREGEGW LIGTVFDVDA GCTRLTAFDA QHVAAGPVAT ASLNGVAPLG LHGLFRAA
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