Gene Rpic_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3803 
Symbol 
ID6284893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp49630 
End bp50316 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID642618304 
Productputative hydroxylase 
Protein accessionYP_001892346 
Protein GI187926001 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.327184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCT GCATTCCCAA CGTCTTCACC GCCGCGCAGG TCGCTGCGCT GCGCGATCTG 
CTCGATAGCG CGGGCGATGC CTGGGTCGAT GGCCGCGTGT CGGCCGGATA TTCGGGGGCG
CCGGTCAAGG TCAACCAGCA GATTGATGAG GGCGCAGAAG TGGCCCTGCA GTGCCAGCAG
CTCATCCTGA GCGTGCTGGA GCGGCATCCG CGCTTCATCA GCGCGGCGTT GCCGAACGTG
GTGTACCCGC CCATGTTCAA CCGCTACGGC GAGGGCATGA CCTTCGGCGC GCATGTCGAT
GGCAGCGTGC GCATCCACCC GCACAACGGC ACAAAGCTGC GCACCGACAT CTCGGCCACG
CTGTTTCTGT CAGACCCCGC CAGCTATGAC GGGGGCGAAC TGCAGATTGA AGACACGTAC
GGCATGCACA GCGTCAAGCT CAATGCCGGC GATCTGGTCA TCTACCCGGC AACGAGCCTG
CATCAGGTGA CGCCCATCAC GCGCGGGGTG CGCGTAGCGA GCTTCTTCTG GATCCAGAGC
CTGATTCGCG ACGACGCGCA GCGCGCCATG CTGTTCGACC TGGACAACGC CATCCAGATG
CTCAACCAGA CCGACGCGGA TGCCACCGCG CGCCGCACGC TCATCGGCGT GTATCACAAC
CTGATGCGGC AGTGGAGCGA GACCTGA
 
Protein sequence
MLVCIPNVFT AAQVAALRDL LDSAGDAWVD GRVSAGYSGA PVKVNQQIDE GAEVALQCQQ 
LILSVLERHP RFISAALPNV VYPPMFNRYG EGMTFGAHVD GSVRIHPHNG TKLRTDISAT
LFLSDPASYD GGELQIEDTY GMHSVKLNAG DLVIYPATSL HQVTPITRGV RVASFFWIQS
LIRDDAQRAM LFDLDNAIQM LNQTDADATA RRTLIGVYHN LMRQWSET