Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3780 |
Symbol | |
ID | 6284865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 20561 |
End bp | 21865 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642618281 |
Product | Xanthine/uracil/vitamin C permease |
Protein accession | YP_001892323 |
Protein GI | 187925978 |
COG category | [R] General function prediction only |
COG ID | [COG2252] Permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0612559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.111868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGC TTACGCGCTT TTTCAAGCTC AAGGAACATC AGACCGACGT GCGCACCGAG GTGCTCGCCG GCCTGACGAC GTTCCTCACA ATGGCGTACA TCGTCTTCGT GAACCCGAAC ATCCTGGCCG ACGCGGGCAT GCCCCACGAC GCCGTGTTCG TGGCCACCTG CATCGCTGCC GCCACCGGCA CGATCATCAT GGGGATGTAC GCCAACTATC CGATCGCCAT GGCGCCCGGC ATGGGGCTGA ACGCCTATTT TGCGTATGCG GTGGTCAAAG GCATGGGCTT TACGTGGCAG GCGGCGCTCG GCGCGGTGTT CATTTCGGGC TGCCTGTTCC TGCTGGTGAG CGTATTCCGC ATCCGCGAAA TGATCGTCAA CGGGATTCCG CATTCGATCC GCGTGGCGAT CACGGCGGGA ATCGGGCTGT TCCTGGGCAT CGTGTCGCTG CGGGGTGCCG GCCTGGTCGT CGGCAATCCG GCGACGCTGG TTTCCCTGGG CGATGTGCAT CAGCCATCGG TCATTCTCGC CGTGATCGGC TTCTTCCTGA TCGTGGCACT GGACCATCTG CGCGTGAAGG GCGCCATCCT GATCGGCATT CTGGCCGTGA CGGCAGCGAG CTTCTTCTTT GCCGGCAACA CTTTCCACGG GGTGGTGTCG ATGCCGCCGT CGCTGACGCC GACGCTGCTC CAGCTCGACA TCATGGGCGC GCTCTCGGTT GGCATCCTCA ACGTGGTGCT GGTGTTCTTC CTGGTGGAGC TGTTTGACGC GACCGGCACG CTGATGGGCG TGGCCAACCG TGCCGGTCTG CTCAAGCAGG GCAAGATGGA CCGTCTGAAC AAGGCGTTGC TGGCGGACAG CACGGCCATC ATGGCCGGGT CGCTGCTGGG CACGTCGTCC ACCACGGCCT ACATCGAAAG CGCGTCCGGG GTGCAAGCCG GAGGCCGCAC GGGCCTGACC GCACTGACGG TTGCGGTGCT GTTTCTGCTG TGCCTGTTCT TCTCGCCGCT GGCCGGGGTG GTACCGGCGT ACGCCACCGC GCCCGCGCTG CTGTACGTGT CCTGCCTGAT GCTGCGCGAA CTGGTGGACC TGAACTGGGA GGACACCACC GAAGCCGTGC CGGCCGTGCT GACCGCGCTG ATGATGCCGT TCACCTATTC GATTGCCAAT GGTGTCGCGT TTGGCTTCAT CACCTACTCG GGCCTCAAGC TATTTACCGG CCGTGCCCGC GAGGTGCCGA TCATCGTGTG GATCATCTCG GCCGTGTTTC TGTTCCGATT CTTCTATCTG TCGGGCGGAC ACTGA
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Protein sequence | MTWLTRFFKL KEHQTDVRTE VLAGLTTFLT MAYIVFVNPN ILADAGMPHD AVFVATCIAA ATGTIIMGMY ANYPIAMAPG MGLNAYFAYA VVKGMGFTWQ AALGAVFISG CLFLLVSVFR IREMIVNGIP HSIRVAITAG IGLFLGIVSL RGAGLVVGNP ATLVSLGDVH QPSVILAVIG FFLIVALDHL RVKGAILIGI LAVTAASFFF AGNTFHGVVS MPPSLTPTLL QLDIMGALSV GILNVVLVFF LVELFDATGT LMGVANRAGL LKQGKMDRLN KALLADSTAI MAGSLLGTSS TTAYIESASG VQAGGRTGLT ALTVAVLFLL CLFFSPLAGV VPAYATAPAL LYVSCLMLRE LVDLNWEDTT EAVPAVLTAL MMPFTYSIAN GVAFGFITYS GLKLFTGRAR EVPIIVWIIS AVFLFRFFYL SGGH
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