Gene Bphyt_7070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7070 
Symbol 
ID6279900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3450673 
End bp3452076 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content61% 
IMG OID642618093 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001890729 
Protein GI187921697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.710966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCA TCGACAACAC CATGGGGGAC CGCAGCAGCG CCGGTGTCTC AGGCCCTGTA 
ACGCGGGGCT CGATCATCGC GCGTCTGGAG CGCTTGCCCA AGAACGCGAT GCAGGTGCGC
GCGCGTATCC TGATCGGTCT CGCGACGTTC TTCGACGGCT TCGACGTGAT CGCGATCGCG
GCCACGTTGC CGATCCTGAT CGCGAAGTGG CATTTGACGC CGTGGGAAAT CGGCTTCCTG
ATCGGCTCCG GTTCGGTCGG CCAGTTGATC GGCGCGTTTG TTTTCCCGTG GTACGCGGAA
CGCAAGGGCC GCGTGAAGGC GATTGCGCTG AGTTCGGGGA TCATCGGCAT CACCAGCATT
GCGTGCGGTT TTGCGCCTAC GTTCGCGGCG TTCGTCGTGT TGCGTGTGAT TCAAGGGCTT
GGGCTCGGTG GCGAATTGCC GGTGGCCGCG ACTTACATCA ACGAGATCAG CCGTGCGCAT
GGCCGTGGCC GTTTCGTGCT GTTGTATGAA ATCGTTTTCC CGGTCGGCCT GCTTGCGTCG
AATGCGTTGG GCGCGTGGAT CGTGCCGCGT TTCGGCTGGC AAGCCATGTA CTTTATCGGC
GGTATGCCGT TGATTCTGTT CTTCGTGCTG CGCAAACTCG TGCCGGAATC GCCGCGCTGG
CTTGCTGAAC GTGAACAGAT GGCTGACGCG GATGCGGCGG TGCATGTGTT CGAGCGTGCG
GTCAAAGGTC CGCTTCCGCC GGTCACGCAC TCGGCTGAAT TCGAAGCGAT GGCCAATCGT
CATCCGAAGC GCCGCATGGG TGACCTGTTT GGCCCCGCGT ATCTGAAGCG CACGCTGGCC
GTGGCGATGT TGTGGATCAC GTGCGGCTTC ATTCAATACG GTCTTTCGAC GTGGCTGCCG
ACGATCTATC GCACGATTTA TCACGCGCCG CTGCAACTCG CGTTGAATCT GGCGGTGGCC
GCTTCGGTGC TCGGCGTAGT GGGTTCCCTG ACCTGCGCGT TGCTGGTGGA TAAGGTGGGG
CGTAAGCCGA TTATCAATCT GTCGTTCGTG GCGTGTGCGA TTTCGCTGCT GCTGGCGGGC
GTGTTCCACG ATTCGTCGGT GTATGTGGTG GCGACGTTCT GCGCGTTCTC GTTGGGCTTC
CTGGCGTGCG GGTTCATCAC GGCTTATGTG TACACGCCGG AACTGTATCC GACGAGTATC
CGCGCGATGG GCTGCGGCGT AGGCGGCGCG TGGCTGAAGG TGGCGGCGAT CTTCGCACCG
GCTATCGTGT CGAAGACGAT GATCGGCGGA AATTTGCAGG TTGCCTTTTA TATTCTCGCG
GCTGTCCCGT TTCTTGCGGC GGTGGCGGTG CACTTTCTTG GGATTGAGAC CAAGGGGAAG
GTGCTGGAAC AGCTTGAGGC TTGA
 
Protein sequence
MRTIDNTMGD RSSAGVSGPV TRGSIIARLE RLPKNAMQVR ARILIGLATF FDGFDVIAIA 
ATLPILIAKW HLTPWEIGFL IGSGSVGQLI GAFVFPWYAE RKGRVKAIAL SSGIIGITSI
ACGFAPTFAA FVVLRVIQGL GLGGELPVAA TYINEISRAH GRGRFVLLYE IVFPVGLLAS
NALGAWIVPR FGWQAMYFIG GMPLILFFVL RKLVPESPRW LAEREQMADA DAAVHVFERA
VKGPLPPVTH SAEFEAMANR HPKRRMGDLF GPAYLKRTLA VAMLWITCGF IQYGLSTWLP
TIYRTIYHAP LQLALNLAVA ASVLGVVGSL TCALLVDKVG RKPIINLSFV ACAISLLLAG
VFHDSSVYVV ATFCAFSLGF LACGFITAYV YTPELYPTSI RAMGCGVGGA WLKVAAIFAP
AIVSKTMIGG NLQVAFYILA AVPFLAAVAV HFLGIETKGK VLEQLEA