Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6979 |
Symbol | |
ID | 6278190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3355655 |
End bp | 3356614 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618002 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001890638 |
Protein GI | 187921606 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCG TCGCGATCGC GATCTTTTCC GGCGTGCAGG CGCTCGACGT CGCCGGTCCC GTCGACGTGT TTTCCGAAGC CAACCGCTTC ATCGCGCCCG CGGATGCCTA CGAAGTGAAG TTGATCAGCG CCGAAGCCGC ACCGCTGCGC GCGTCCAACG GCATGATGCT GATCGCCGAC GCGACCTTCG GCCAGGCACG CGGTCCGTTC GATCTTGCGC TGGTCGCGGG CGGCCCGGCG CTGCCGGACA CCGCACCTGA GGCGCCACTA TTGGAGTGGC TGGCGAACGT CGCCACACAA TGCGGCCGCT ACGGTTCGAT CTGCACCGGC GCATTCGCGC TCGGTCACGC GGGCCTGCTC GACGACCGCA ACGTGACGAC GCATTGGCAG CACGCCGCGC AGCTGGCGGC GCAATTTCCA AAGGCGCGCG TCGACTTCGA CCGCATCTAT CTGCGCGATG GGCAACTCGT CACATCGGCC GGCGTGACCG CGGGCATCGA TCTGTCGCTC GCGTTAGTCG CCGAGGATCA TGGCCCGCAC ACGGCGCTCG CCGTCGCCAA ACGGCTGGTG GTGTTCGCAC AGCGGCAAGG CGGCCAGTCG CAATTCAGCC CCTACCTGAC CGCGCCCGCC GACGACACCT CGCCGGTCGC CAAAGTCCAG GCGCACGTCA TGGAACGGAT TCGCGAGAGC TTTTCGGTGA AGCAACTCGC GGAGGTCGCG GGCATGAGCG CCCGCAACTT CGCGCGCGTG TTCGTGCAGG AGACCGGCGT GACGCCGCAT GAATTCGTCG AACGCGCCCG CGTGGATGCG GCGCGCAAGC TGCTCGAAAG CAGCGGTGCG GCGCTCAAGG CGATTGCGTA CGACTGCGGC TTCGGCACGG CGGACCGCAT GCGCATTGTC TTCACCAAAC GAATCGGCGC GACGCCGATG CAGTATCGCG AGCGCTTTCG CTCGGCCTGA
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Protein sequence | MPTVAIAIFS GVQALDVAGP VDVFSEANRF IAPADAYEVK LISAEAAPLR ASNGMMLIAD ATFGQARGPF DLALVAGGPA LPDTAPEAPL LEWLANVATQ CGRYGSICTG AFALGHAGLL DDRNVTTHWQ HAAQLAAQFP KARVDFDRIY LRDGQLVTSA GVTAGIDLSL ALVAEDHGPH TALAVAKRLV VFAQRQGGQS QFSPYLTAPA DDTSPVAKVQ AHVMERIRES FSVKQLAEVA GMSARNFARV FVQETGVTPH EFVERARVDA ARKLLESSGA ALKAIAYDCG FGTADRMRIV FTKRIGATPM QYRERFRSA
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