Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6977 |
Symbol | |
ID | 6280158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3353309 |
End bp | 3354502 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618000 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001890636 |
Protein GI | 187921604 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.862151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGAC CGCTTCAGGG TATCCGCGTC ATCGAGATCG GAACCCTTAT CGCCGCGCCG TTTGCCGCGC GCCTCATGGC CGAGTTCGGC GCCGACGTCA TCAAGATCGA AGCGCCCGAG ACCGGCGATC CCCTTCGCAA ATGGCGCAAG CTGCATGAAG GCACTTCGCT CTGGTGGTAT CTGCAGTCGC GCAACAAGAA GTCCATCTGC GTGAATCTGA AGTCGGCGGA CGGTGTCGAG ATCGTCAAAC GGCTCGCGGC CGATGCCGAT GTCGTGATCG AAAACCTGCG CCCGGGCGCG CTCGAAAAGC TCGGCCTCGG CTGGGACGTG CTGCACGCCA TCAATCCGAA ACTGACGATG GTCCGCATTT CCGGCTACGG CCAGAGCGGT CCCTATCGCG ATCGTCCTGG CTTCGGCGCG ATCGGCGAAG CGATGGGCGG CATCCGCTAC ACGACCGGCG ACCTGGACGG CGCGCCGGCG CGCGTCGGCG TGAGTCTCGG CGATTCGCTC GCCTCGCTGC ATGGCGTGAT CGGCGCGCTG ATGTCGCTGC TGCGCGTGAA GACGGGGCAG GGCGAAGGCC AGGTGGTCGA TGTCTCGCTG GTCGAGAGCG TGTTCAATCT GATGGAAAGC TTGGTGCCGG AATACGATCT GCTCGGCCAT GTGCGCGAGA GGAGCGGCGG CGCGTTGCCG GGCATCGCGC CATCGAATAC GTATCGCACG GAAGACGAAG GCTTCGTCGT GATCGCCGGC AACAGCGATC CGATTTTCAA ACGCCTGATG CAGGTGATCG GCCGTCCCGA TCTCGCCGAC GATCCCGCAT TGGCGCGAAA TGACGGCCGC GTTCAGCACT GCGCGATGCT CGATCAGGCG ATCACCGAAT GGACCTCGCA TCACTCCACC GACGACGTGC TGGCGGCGCT CGAACGCGCC GAAGTGCCCT CGGGACGCAT CTATTCGGTG GCCGATATCG TCGCCGATCC GCACTACCGG GCACGCAACA TGTTGTTGGA CGCGCAACTG CCGGGCGGCG CGTCGGTGAA GATGCCGGGG ATCGTACCGA AGCTCTCGGA CACACCGGGC GAAGTGCGCT GGCAAGGACC GACGCTCGGC GAGCATACCG GCAGCGTGCT CAGCGACCTC GGATTCGCCA ACGACGATAT CGAGCGGCTG CGCCGCGAAG GAGCCGTGCA ATGA
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Protein sequence | MGGPLQGIRV IEIGTLIAAP FAARLMAEFG ADVIKIEAPE TGDPLRKWRK LHEGTSLWWY LQSRNKKSIC VNLKSADGVE IVKRLAADAD VVIENLRPGA LEKLGLGWDV LHAINPKLTM VRISGYGQSG PYRDRPGFGA IGEAMGGIRY TTGDLDGAPA RVGVSLGDSL ASLHGVIGAL MSLLRVKTGQ GEGQVVDVSL VESVFNLMES LVPEYDLLGH VRERSGGALP GIAPSNTYRT EDEGFVVIAG NSDPIFKRLM QVIGRPDLAD DPALARNDGR VQHCAMLDQA ITEWTSHHST DDVLAALERA EVPSGRIYSV ADIVADPHYR ARNMLLDAQL PGGASVKMPG IVPKLSDTPG EVRWQGPTLG EHTGSVLSDL GFANDDIERL RREGAVQ
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