| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6942 |
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| Symbol | |
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| ID | 6280464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3315850 |
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| End bp | 3317550 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642617969 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001890605 |
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| Protein GI | 187921573 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.819674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA ACCAGCCTGT CACCGGGCAC GAATACGAAT TCCCGTCGTC ACACATGCTT
GTTTCGGCGA CCGATCTGAC CGGCCGCATC CAGTACTGCA ATCCGGCCTT CATCGCGGTC
TCGGGCTTTA CGCGCGACGA ACTGATCGGT CAACCGCACA ATCTGATCCG TCATCCGGAC
ATGCCGCGCG AAGCCTTTGC CGACCTGTGG GCGACGATCC GCGACGGCCG TCCCTGGACC
GCGCTCGTGA AGAACCGCCG CAAGAACGGC GATCACTACT GGGTGCACGC CAATGTCACG
CCGGTGGTCG AGAAAGGCGC GGTCGTTGGC TATTTGAGCG TGCGCGTGAA ACCGGAACGC
ACCGCGGTGC GCGCCGCAGA AGCGCTCTAC GCACGCATGC GCAGCGGCGA GTCTCGCGGC
GTGCAGTTGC GCCGCGGGGT GGTGGTGCGC ACCGGCGTGC TGGGGCGTCT GCAGGCGCTG
ATGCGTCTGC CGGTCGCCAC GCGCGCGGCG CTCGGCTACG CGATCACGCC GCTGGCGCTG
CTGTTGACGG GCCTCGCCGC ATGGCAAGGT GCGCCGCCCG CGCCGTTCTG GATCGGGTTC
GGCGTCGCCA CGGCGGTCAG CATCGCCTCG TGTCTGATGC TGACGCGGCA ACTTGCCGCG
CCGGTACGCG ACATGTCGGG ATTCGCCACG CGTCTCGCCG CCGGCGATCT GACCGCCGAT
CTGCAGATCG CGCGCCACGA CGACCTCGGC GACGTGCTGC AAGCGCTGAA TCAGTTGAAG
GCGAATCTCG CGGCGATCGT CTACGACGTG CGCGCCCAGA TCACCGGCAT GCTGGACAAC
GCGCGCGAGA TATCCAGCGG CAATGTGGAT CTCGCGAGAC GCACGGAATT GCAGGCGGCG
TCGCTCGAAG AAACCGCGGC CACCATGGAA GAACTGACCA CGACCGTCCA GGCTAACGCC
GATGCCACCG TGCGCGCGCT CGATCTGGCG AGAGAGGCCC AGGCGGCGGC CGCAGTCGGC
GGCAAGATTG CCGGCCAGGT CGAGCAGACC ATGGCGGGCA TCACCGCGGC ATCGCGGCGT
ATTGCCGACA TCACCGGTGT GATCGACGGC ATCGCGTTCC AGACCAATAT CCTCGCGTTG
AACGCTGCCG TCGAAGCGGC GCGGGCGGGC GAGGCAGGCC GTTCGTTCGC CGTCGTCGCG
GGCGAAGTGC GCATGCTGGC GCAACGCTGC GCGGCGTCGT CGAAGGAAAT CAAGTCCGTG
GTCGAAGCAA GCGCATCCGA AGTCGCGGCC GGCACCGAAC TGGTTGCGCG GACAACATCG
CAAATGCGCG TGATCGACGA GGCGGTGGGC CGCGTGTCGT CGATCATCGT CGACGTGGCG
AACGCGAGCA GCGAACAGGC CGAAGGGATT CGCCAGGTCA ATCAGGCGGT CTCGCATCTG
GACGGCGCCA CGCAGCAGAA CGCCGCGCTC GTCGAGCAGG CGGCGGCCAC CGCGCAGCGC
CTGGCGGAAC AGGCGGACGT GCTGGACGAA GCCGTGCGAC TGTTCACTGT CGCCGACGCA
GCGCCGGCGC AACGCGTTGC CGGCACGAAG CGCGAGGTGT TCACCGTCGA TGCAGCGCGA
ATGCCCGCGC CCGGGATCAA ACGACACCGC GCGCCCGTCA TCGCCGATGA TGCCGAGCGG
GAAGAAGCTG CATTGATCTG A
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| Protein sequence | MRNNQPVTGH EYEFPSSHML VSATDLTGRI QYCNPAFIAV SGFTRDELIG QPHNLIRHPD
MPREAFADLW ATIRDGRPWT ALVKNRRKNG DHYWVHANVT PVVEKGAVVG YLSVRVKPER
TAVRAAEALY ARMRSGESRG VQLRRGVVVR TGVLGRLQAL MRLPVATRAA LGYAITPLAL
LLTGLAAWQG APPAPFWIGF GVATAVSIAS CLMLTRQLAA PVRDMSGFAT RLAAGDLTAD
LQIARHDDLG DVLQALNQLK ANLAAIVYDV RAQITGMLDN AREISSGNVD LARRTELQAA
SLEETAATME ELTTTVQANA DATVRALDLA REAQAAAAVG GKIAGQVEQT MAGITAASRR
IADITGVIDG IAFQTNILAL NAAVEAARAG EAGRSFAVVA GEVRMLAQRC AASSKEIKSV
VEASASEVAA GTELVARTTS QMRVIDEAVG RVSSIIVDVA NASSEQAEGI RQVNQAVSHL
DGATQQNAAL VEQAAATAQR LAEQADVLDE AVRLFTVADA APAQRVAGTK REVFTVDAAR
MPAPGIKRHR APVIADDAER EEAALI
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