| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6896 |
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| Symbol | |
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| ID | 6278031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3263331 |
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| End bp | 3264845 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617923 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001890559 |
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| Protein GI | 187921527 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.426668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGCC TTTATTTGCG CTCCTTCCTC TTCAGCATTC GTGCGAAGGT TATGAACCTG
TTCGCATATC CCACATACCA GGCTTTCGCC GACATGATGC TGCCGATGCG GCACGGCGCG
GCGCTGGTGA ATCATTCGCT CGACGCGTGG CCTGCGTTCG GCGAAACGTC GCATGGACGC
TCCATCCGCG CGGCCTGCGA GTTGTTGACG CTGGCCGGAC TCACGCCCGT GCGACCGCCG
TTCGAGATCG ACAGCGTGAT ATCGGAAGGC AAATCCGTGG CGGTCGTCGA GGAAGTCGCG
GCGCACACGC CGTTCTGTTC GCTGCTGCAT TTCCGTAAGG AGACGCCGCC GTCGGTGCCG
CAACCGCGCG TGCTGGTGAT CGCGCCGATG TCCGGCCACT TCGCGACGCT GCTGCGCGGC
ACCGTGCGCA CGATGCTGGC CGAACACGAC GTCTACATCA CCGACTGGCA CAACCCGCGC
GACGTGCCGC TAAGCCAGGG CCGCTTCGGC TTCGACGAAT TCGTGCAGCA CGTGATCGAC
TTCACCGAAA CGATCGGGCC CGGTGCGCAT CTGCTCGCCG TGTGCCAGCC GACCGTCGCC
GCGCTGGCCG CAGTCGCGCT CATGGCCGCC GACGATCATC CCGCGCAACC GGCGAGCATG
ACGCTGATGG CCGGTCCGCT CGACACGCGT ATCAACCCGA CGCGCGTCAA CGAACTCGCC
AAAAGCAAAC CGCTGGAGTG GTTCGAGCAG AAGCTGATCA GCGCGGTGCC GTTCGGTTTT
GCGGGCGCGC ACCGGCGCGT GTATCCGGGC TTCATGCAGC TGACCGCGTT TATGGCGATG
AATCTCAACC GCCATCTCGA CTCGTTCGAG ACGATGTATT ACGAGCGCGC CAAAGGCGAT
CCAGCGAAAG CCGACACGAT CCGCACGTTC TATGAAGAAT ACTTCGCGAC GATGGATCTC
ACGGCCGACT TTTATCTGGA AACCGTCGAT ACGGTTTTTC AGCGTCATGC ACTGCCGTTG
CATGCGCTCG AAGTGAAAGG GCGTCTCGTC GAACCGTCTA AGATTCGCCG CACCGCGTTG
CTTACTGTCG AAGGCGAGAA GGACGATATC TGCGCCGTCG GTCAGACGCT CGCCGCGCAG
GACATGTGCG ACAAGCTGCG GCCGTATTTG AAGACGCATC ACGTGCAGAC CGGCGTGGGG
CACTACGGCG TGTTCAATGG ACACCGCTGG GAGCGGCACA TTTATCCGCG CGTGCGCGCC
GTGATTTATG ACAACGAACC GCGCGCGGTG CTGGTGAGTT CACGAGCGCG CACGATTCAG
CCGGTGCCAG CCGCGACGGC TGCGGAAGTC ACTCCAGCAG CGCCGGCGGC AACGGCGGTG
GTCGATGTGG ACGTGGATGC GGCGGCCATG GACGCTGCGA ACGGCACCAG CACCACGTCG
AGTGCGCGTT CGGCTGCGGC CATCAAGCCG CAGACGGCGC GCACTCCGCG TAGACGGCCG
CCCGCCGCGC AATGA
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| Protein sequence | MTCLYLRSFL FSIRAKVMNL FAYPTYQAFA DMMLPMRHGA ALVNHSLDAW PAFGETSHGR
SIRAACELLT LAGLTPVRPP FEIDSVISEG KSVAVVEEVA AHTPFCSLLH FRKETPPSVP
QPRVLVIAPM SGHFATLLRG TVRTMLAEHD VYITDWHNPR DVPLSQGRFG FDEFVQHVID
FTETIGPGAH LLAVCQPTVA ALAAVALMAA DDHPAQPASM TLMAGPLDTR INPTRVNELA
KSKPLEWFEQ KLISAVPFGF AGAHRRVYPG FMQLTAFMAM NLNRHLDSFE TMYYERAKGD
PAKADTIRTF YEEYFATMDL TADFYLETVD TVFQRHALPL HALEVKGRLV EPSKIRRTAL
LTVEGEKDDI CAVGQTLAAQ DMCDKLRPYL KTHHVQTGVG HYGVFNGHRW ERHIYPRVRA
VIYDNEPRAV LVSSRARTIQ PVPAATAAEV TPAAPAATAV VDVDVDAAAM DAANGTSTTS
SARSAAAIKP QTARTPRRRP PAAQ
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