| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6885 |
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| Symbol | |
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| ID | 6278429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3244965 |
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| End bp | 3245804 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617912 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001890548 |
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| Protein GI | 187921516 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.471707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.190136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTG CCAAGCCTTT GTTCGCGCCG CATACGTCTT TCGTTGAGCG CGTGTGGTAT
TTCGCGTTGC GCGCGCTGGC CGTGTTCACG CTGCTGTATC TCATCTTGCC GGTGCTGGCG
ATCGTGCCGC TGTCGTTTTC GTCGAGCACG TTTCTGGTGT ATCCGATTCC GGGCTGGTCG
TTGCGCTGGT ATCAGAATCT GATCGCATCT GATGAATGGC GCATGGCTGC TAAGAACAGC
TTTATTGTCG CGCCGTCGGC GACGGTGGTC GCAACCGTGC TCGGCACCTT GGCGGCAATC
GGACTGACCA AGGCGAACTT TCGCGGCAAA GGCTTGCTCA TGGCGATCCT GATTTCGCCG
ATGATCGTGC CGGTGGTGGT GGTCGGCGTC GGCATGTATC TGTTCTTCGC GCCGCTCGGC
TTGGCCAATA CCTACATCGG GCTGATTCTC GCGCATGCAT CGCTCGGCGT GCCCTTTGTC
GTGACGACGG TGGCCGCGAC GTTGCAGGGT TTCAACTACA ACCTCGTGCG GGCGAGTCTG
TCGCTGGGCG CGAATCCGGT GAGGACGTTC TTCCGCATCA CGTTGCCGGT GATCGCGCCG
GGCGTGATTT CGGGCGCGCT GTTCGCCTTC GCGACGTCGT TCGATGAAGT CGTCGTCACC
TTGTTCCTGG CGGGCGCGGA TCAGACTACG TTGCCCCGAC AGATGTTTAC CGGCATCCGC
GAAAATATCA GCCCGACCAT CGCCGCGCTG GCGACAATTC TGATTGTTTT TTCCACTAGT
CTTTTATTAG CGCTTGAATG GCTGCGTGGG AGAAATGCAG CGCGAGCAGT TAAGGCCTGA
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| Protein sequence | MKLAKPLFAP HTSFVERVWY FALRALAVFT LLYLILPVLA IVPLSFSSST FLVYPIPGWS
LRWYQNLIAS DEWRMAAKNS FIVAPSATVV ATVLGTLAAI GLTKANFRGK GLLMAILISP
MIVPVVVVGV GMYLFFAPLG LANTYIGLIL AHASLGVPFV VTTVAATLQG FNYNLVRASL
SLGANPVRTF FRITLPVIAP GVISGALFAF ATSFDEVVVT LFLAGADQTT LPRQMFTGIR
ENISPTIAAL ATILIVFSTS LLLALEWLRG RNAARAVKA
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