| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6877 |
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| Symbol | |
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| ID | 6279557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3238817 |
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| End bp | 3239665 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617904 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001890540 |
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| Protein GI | 187921508 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.44202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.236488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTC CTATCATTCT TGGACTGGCG TTTGTCGGCA GCCTCGCGCT GATATTTCTG
GTATCACGCA TGGGGACCGC CACGCTCAGA GCCGGCTCGC GGCAAATGGC CGGCGAAATC
GAATCGTCGC TCGCCGACGC CTTCGTGTTC GTCAACCGGC AAAGGGCCGC GGCCTGGAGC
ATGGTCTTCA TGATCGGCCT GCCGATCATT GCCTTCCTGT TGACTGGCAG CATCTTGATC
GCGCTTCTCG CGGTCCCTAT CGCGATGACG CTGCCAAAAA AGTATCTCGC GCGAATGCGC
AAGAAACGCA TTGGAACGCT GGAGAAGCAA CTGCCCGACG CGCTGCTGAT GATGTCGGGC
GCATTGCGCG CGGGCGCGAG CTTTCCCAGC GCGCTTGAAG CCGTAGTGCA TGAAACGACG
CCGCCAATTT CGCAGGAATT CGACTTGTTG ATGCGTGAAA TCCGCCTCGG CATCGACATG
GACATTGCCA TGCGCAACGT CGAGAAACGC ATTCCGATCC CCGACTTTTT GATGATGACC
GCCGCGGTCA CCATCGCGCG CGAGGTGGGC GGCAATCTTG CGGAAGCACT GGAATCCGTC
GCGCGCACCT TGCGCGAAAA GCTGCAGATG GAAGGCAAGA TCAAGGCGCT CACTTCGCAG
GGCCGCATGC AGGGCATCGT GATGACCTGT CTGCCACTCT TTCTGATGCT GGTGTTGCGG
TTCATGGAGC CCAAGGCGAT GGCGCCGCTC TTCACCGAGC CGGTCGGCTG GGCCACGCTG
GCGGTTATCG GCGTCATGGA GTTTCTCGGC TACGTCTCGA TTTCCAAGAT CACCAACATC
GACGTGTGA
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| Protein sequence | MSLPIILGLA FVGSLALIFL VSRMGTATLR AGSRQMAGEI ESSLADAFVF VNRQRAAAWS
MVFMIGLPII AFLLTGSILI ALLAVPIAMT LPKKYLARMR KKRIGTLEKQ LPDALLMMSG
ALRAGASFPS ALEAVVHETT PPISQEFDLL MREIRLGIDM DIAMRNVEKR IPIPDFLMMT
AAVTIAREVG GNLAEALESV ARTLREKLQM EGKIKALTSQ GRMQGIVMTC LPLFLMLVLR
FMEPKAMAPL FTEPVGWATL AVIGVMEFLG YVSISKITNI DV
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