| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6874 |
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| Symbol | |
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| ID | 6277758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3234070 |
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| End bp | 3235170 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617901 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001890537 |
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| Protein GI | 187921505 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.367067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.327856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAGA AAATTAAATT CCGCTCGCTT CTCGCGAACT CCTGGATACT TCTGTTCCTC
GCCGTGCTAG TCGCGGCTGG TCTGACGTTC CTCCTCTACA AATACTTGAG CGACCGCGAA
AAAAAGCTCA AAGACGATAT GAGCGCGCAC CGCGTCCGCG CCGGGGTCGT CGTCGTCGTT
CCGGCGAGGG ACGTGCCGGT CGACACGCCT TTGTCCAGCA GTGATTTCGT TGCGCGTGAG
ATCGACGGTG ATCTGGTCTA CGACGACATG ATCCGTGCGG ACAACTTCGA CAAATATCGC
ATGTCGCATC TGGTGAAACC GGTGCGTCGT GGTCTGCCAC TACGTGCCGC CGATATCGAC
GCGCTGCACG GCCGTGACTT CTCCGACGTT CTGCGTTCGG GAACGCGGGC TGTCACGGTC
GACATCGACA CGGTCAATTC GACTGCCTTG ATGCTACGTC CCGGCAATCG CGTCGACGTG
TACTGGATCG GCAAGGTATA TCACCAGGAC AACTCCAACG ACGACAAGAA AGTCGCACAG
CTCATGCTGG CGAATACGCT AATCCTTGCC ACTGGCCAGG ACATGCGCCC ACGCGACGCC
GGCGAAGCCA TGCAGGAAGA CCCGGCGAAT GCCAACAGCA GCGCCATGAG CCGCCAGCCA
GGCGTCGGCT ACACGACGGT CACTCTGGAA GTTCCGGTTG CGGACGCCGG GCGCATTGCG
CTTGCACAAA AAATCGGCGG TCTGCGCCTC ATTCTCCGTA ACTCGGATGA CAAGGGCACG
AACGGTCCTA GCCTCGTTCA GGAAAACGAT GTGTTCGTCG ACCCGGGCCG CGGAAGGCTG
AGCGGCTCCG GTCCGGCGCC GAAAACCGTC GAGATCATTG CTGGCGGTAG CTCGAATAGC
AGCACTGTGC TCGTCAGCCA AGGCCCGTCT ACGGCATCCG CCGAGGAACC GCAGAAAACT
GCACCGGCGG CGATACCAGC CAGTGTCGAT CAACCGATGC CCGCTTCGCC GCAACGTCAA
CCGAGTCTCT ACGAGCAGGC CAACGCCATT GCCCAGCAAT TGCAGAAGGC GACCGCACGC
AGCACGTCGA AGCAGAACTA A
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| Protein sequence | MLKKIKFRSL LANSWILLFL AVLVAAGLTF LLYKYLSDRE KKLKDDMSAH RVRAGVVVVV
PARDVPVDTP LSSSDFVARE IDGDLVYDDM IRADNFDKYR MSHLVKPVRR GLPLRAADID
ALHGRDFSDV LRSGTRAVTV DIDTVNSTAL MLRPGNRVDV YWIGKVYHQD NSNDDKKVAQ
LMLANTLILA TGQDMRPRDA GEAMQEDPAN ANSSAMSRQP GVGYTTVTLE VPVADAGRIA
LAQKIGGLRL ILRNSDDKGT NGPSLVQEND VFVDPGRGRL SGSGPAPKTV EIIAGGSSNS
STVLVSQGPS TASAEEPQKT APAAIPASVD QPMPASPQRQ PSLYEQANAI AQQLQKATAR
STSKQN
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