| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6866 |
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| Symbol | |
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| ID | 6279466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3219035 |
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| End bp | 3219643 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642617893 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001890529 |
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| Protein GI | 187921497 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.140006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.169631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGAG TTGTGATTAT TGATGATCAT CCAATCATTC GAGGGACAAT AGCCAGCGTG
TTGCGCGCTG ATCCCGAACT GGAGCTGGTT GGAGAATCGG GCGACGGCGA AGACGGTCTG
GCAATGGTGC TGACAAAACA CCCGGACTTG GTCATTATTG ATCTCGATTT GCCACGGCTC
GACGGCCTCA CAATGATCCG CCGCATTCGA GCAAATAGTA TAAAAATATC TATTCTTGTG
CTCTCTGCCA AGCCTGAGCA CATTATGGCC GGTTATGCGC GTAACGCGGG CGCAAATGGT
TATGTCAGCA AGGGCCGGGA AATCAGCGAA TTGGTCACAG CATTAAAAAC GGTTTTATTC
GGCTACGACT GCTTCCCGGC CGATAATGGT GACGTTGCGC CCGCGAGTGG CCTGAGCACT
TTGTCGGCGC GTGAGGTGGA GGTTTTGCAA CATCTCGCAC GCGGCGTGAG CAATCGCGAC
ATTGCCGGTC GATTGTCCCT CAGCGACAAA ACTGTCAGTA CATACAAGAG CCGTATCCAG
GAGAAACTCG GCCTCACATC GTTGGCAGGA CTCATCGAGT TCGCGACTTT GCACCGGCTG
GTCGAATAA
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| Protein sequence | MKRVVIIDDH PIIRGTIASV LRADPELELV GESGDGEDGL AMVLTKHPDL VIIDLDLPRL
DGLTMIRRIR ANSIKISILV LSAKPEHIMA GYARNAGANG YVSKGREISE LVTALKTVLF
GYDCFPADNG DVAPASGLST LSAREVEVLQ HLARGVSNRD IAGRLSLSDK TVSTYKSRIQ
EKLGLTSLAG LIEFATLHRL VE
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