| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6853 |
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| Symbol | sdhB |
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| ID | 6280001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3204060 |
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| End bp | 3204764 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617880 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001890516 |
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| Protein GI | 187921484 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.522484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGC GTACATTTGA AATTTACCGC TACGACCCGG ACAAGGACGC AGCGCCGCGC
ATGCAAACGT ACGAGATCGA GATCGACTCG CACGAACGCA TGCTGCTCGA CGCGCTGCTG
AAGTTGAAGG CAGTTGACGA AACGCTGTCG TTCCGCCGTT CGTGCCGCGA AGGCGTGTGC
GGTTCGGACG CCATGAACAT CAACGGCAAG AACGGTCTGG CCTGCCTGCA GAACATGAAC
GATCTGCCGC AAAAGATCGT GCTGCGTCCG CTGCCGGGAC TGCCGGTCAT TCGCGACCTG
ATCGTCGACA TGACGCAGTT CTTCAACCAG TATCATTCGA TCAAGCCGTA CCTGATCAAC
GACACGCCGC CGCCGGAAAA GGAACGTCTG CAGTCGCCGG AAGAGCGCGA CGAGCTCGAC
GGCCTGTACG AATGTATTCT GTGCGCGAGC TGCTCGACTT CGTGCCCGAG CTTCTGGTGG
AATCCGGACA AGTTCGTCGG CCCGGCCGGC CTGTTGCAAG CCTACCGTTT CATCGCGGAC
AGCCGCGACG AAGCGACGGG CGAACGACTC GACAACCTGG AAGATCCGTA CCGTCTGTTC
CGTTGCCATA CCATCATGAA CTGTGTCGAC GTTTGCCCGA AGGGCCTGAA CCCGACCAAG
GCGATTGGCA AGATCAAGGA ATTGATGGTT CGCCGCGCTG TCTGA
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| Protein sequence | MAKRTFEIYR YDPDKDAAPR MQTYEIEIDS HERMLLDALL KLKAVDETLS FRRSCREGVC
GSDAMNINGK NGLACLQNMN DLPQKIVLRP LPGLPVIRDL IVDMTQFFNQ YHSIKPYLIN
DTPPPEKERL QSPEERDELD GLYECILCAS CSTSCPSFWW NPDKFVGPAG LLQAYRFIAD
SRDEATGERL DNLEDPYRLF RCHTIMNCVD VCPKGLNPTK AIGKIKELMV RRAV
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