| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6834 |
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| Symbol | |
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| ID | 6278123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3182367 |
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| End bp | 3183557 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617861 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_001890497 |
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| Protein GI | 187921465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.373794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.455704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACT CCCTGAACTT CGACACGCTG GCAGTCCGCT CGGGCACGGT GCGCAGCGAC
TTCAACGAAC ATTCGGAAGC GATTTTCCTG ACTTCGAGCT TCGTGTTCGA GAGCGCCGCC
GACGCGGCCG AAAAATTCAA GAATTCCGAA GACAACTACA CCTACTCGCG CTTCACGAAC
CCGACCGTCT CGATGTTCCA GGATCGTCTC GCCGCGCTCG AAGGCGGCGA AGCCTGCATG
GCGACGGCGT CGGGCATGGC CGCGATCATG TCGGTGGTGA TGTCGACGTT GCAGGCGGGC
GACCATCTGG TCAGCTCGCA GGCGCTGTTC GGTTCGACGC TCGGCATGTT CTCGCAGATC
TTCAGCAAGT TCGGCATCAC GACCACGTTC GTCGATCCGA CCGATCTGGA CGCGTGGAAA
AACGCCGTGC GTCCGGAGAC GAAGATGTTC TTCCTCGAAA CGCCGTCGAA TCCGCTGACC
GAAGTCGCCG ACATCGAAGC GATCAGCAAG ATCGCCAACG CGTCCAACGC ACTGTTCGTG
GTGGATAACT GTTTCTGCAG CCCGGCCTTG CAACAGCCGT TGAAGCTCGG CGCGGACGTC
GTGATGCATT CGGCCACCAA GTTCCTCGAC GGCCAGGGTC GCGTGCTCGG CGGCGCGCTG
GTCGGCTCGA AACAGTTCAT CATGGAAAAG GTGTTCCCGT TCGTGCGCAG CGCCGGCCCG
ACGTTGTCCG CGTTCAACGC ATGGGTGCTG CTCAAGGGTA TGGAAACGCT GTCGCTGCGC
GTTGAAAAGC AGTCGGCGAA TGCGCTCGAA ATCGCGCGCT GGCTGGAAGC GCATCCGGCC
GTGAATCGCG TGTTCTATCC GGGGCTTGAA TCGCATCCGC AGCACGCGCT GGCCATGCGT
CAGCAGAAGG CGGGCGGCGC GATCCTCTCG TTCGAACTGA AGGGCGACAC GCCGGAGCAG
ATGCGCGCGA ATGCTTGGCG CGTGATCGAC AACACGAAGA TCTGCTCGAT CACCGGCAAC
CTCGGCGATA CGCGTACCAC CATCACGCAT CCGGCTACGA CCACGCATGG TCGCGTGACG
CCGGAAGCGC GCGCGGCGGC GGGCATTAGC GAAGGCTTGA TCCGTCTTGC CGTCGGTCTG
GAAAACGCCG GCGATATTCG CGGCGATCTG GAGCGCGGTC TGGCGGGTTG A
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| Protein sequence | MDDSLNFDTL AVRSGTVRSD FNEHSEAIFL TSSFVFESAA DAAEKFKNSE DNYTYSRFTN
PTVSMFQDRL AALEGGEACM ATASGMAAIM SVVMSTLQAG DHLVSSQALF GSTLGMFSQI
FSKFGITTTF VDPTDLDAWK NAVRPETKMF FLETPSNPLT EVADIEAISK IANASNALFV
VDNCFCSPAL QQPLKLGADV VMHSATKFLD GQGRVLGGAL VGSKQFIMEK VFPFVRSAGP
TLSAFNAWVL LKGMETLSLR VEKQSANALE IARWLEAHPA VNRVFYPGLE SHPQHALAMR
QQKAGGAILS FELKGDTPEQ MRANAWRVID NTKICSITGN LGDTRTTITH PATTTHGRVT
PEARAAAGIS EGLIRLAVGL ENAGDIRGDL ERGLAG
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