| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6823 |
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| Symbol | |
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| ID | 6277901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3165813 |
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| End bp | 3168023 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617851 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001890487 |
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| Protein GI | 187921455 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.851597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC ATGATCCGGC CGTAGGCCTC CAACCGCTAG ATATCGACGC GCTCGTTGAA
GCGCGCCACC CCGATCCTTT CTCGCAACTC GGGATGCATC AGACGGACGC AGGTCCAGTG
GTGCGCGCTC TGTTGCCGAA CGCCGCGCAC GTCAGCGTGA TTGCGCGCGC CGACGGTGCG
CTGCTAGGCG AACTCGAACA ATTGCGGCCG GGGCTGTTTG CCGGCCGCGT CACGACTGCG
GCGCCGTACC GTTTGCGGAT CGACTGGCAT GGCGTGGTGC AGGAAATCGA GGACACCTAT
TCGTTCGGCC CGGTTCTCGG CGACGAGCCG CTTGGCCGGC TCGCCGGTGG CGATCCGTAT
GCGGTGCTCG AATGCCTCGG CGCGCATCCG ATGGAATTTG AGGGCGTGCC GGGTGTGCGC
TTCGCCGTGT GGGCGCCGAA CGCACGGCGC GTTTCGGTGG TAGGCGACTT CAACGCGTGG
GACGGCCGCC GTCATCCGAT GCGGCTGCGC CATCAGGCCG GCGTGTGGGA ATTGTTCGTG
CCGCGCGTCG GGCCGGGCAC GCGCTACAAA TACGAGCTGC TGTCGCGCGA TGGTCATCCG
CTGCCGTTGA AAGCCGATCC GTGCGCGATG CAGACGGAGA AGCCGCCAGG CACTGCGTCG
ATCGTGGCGC ATGTCGACGA GATCGAACAG TTTCCGTGGA CCGATCACGA ATGGATCCAG
TCGCGCGCCA GCAAGCAGAC GCCGCGCTCG CCGATCTCGA TCTACGAAGC GCATGCGGAA
TCCTGGCTGC GCGTCGCGGA ACAAGGTCAG CGCGGACTCG ATTGGGATGA ACTCGCGGAG
CGGATGATTC CGTACGTGAA AAGCATGGGC TTCACGCACG TGGAGTTCAT GCCGATTGCC
GAGCACCCGT TCGGCGGATC GTGGGGTTAT CAGCCGCTCG GGCAGTTTGC GCCATCGGCG
CGCTTCGGCA AGCCCGAACA GTTCGCGAGA TTCGTCGATA AGGCGCACGA AGCCGGACTC
GGCGTGATTC TCGATTGGGT GCCCGCGCAC TTTCCGAACG ACGCGCACGG CCTGATCGAC
TTTGACGGCA CGCCGCTCTA CGAGCACGCC GACCCGCGCG AAGGCTATCA CCAGGACTGG
AACACGATGA TCTACAACCT CGGCCGCAAC GAGGTGAGCG CGTTCCTGGT CGCTTCGGGG
CTGGCGTGGC TGAAGCGCTA TCACGTCGAC GGTCTGCGCG TGGACGCGGT CGCCTCGATG
CTGTATCGCG ACTATTCGCG CGCGGCCGGC GAGTGGGTGC CGAATATTTA CGGCGGCCGC
GAGAACCTCG AATCGATCGC ATTCCTCAAG CGCCTGAATC ATGAAGTCGG CTACGTGCCG
GGCGCACCGG GCGCGATCAC GATCGCCGAG GAATCGACCG CATGGCCGGG CGTGACGGCG
CGCGTGGAAG ACGGCGGGCT CGGTTTCCAG TTCAAGTGGA ACATGGGCTG GATGCACGAC
ACGCTGCACT ACATGGAAGA AGATCCGGTC TACCGTCAAT ACCATCACCA CAACATGACG
TTCGGGATGG TGTACGCGTA TTCGGAGCGC TTCGTGCTGC CGCTTTCGCA CGACGAAGTG
GTGCACGGCA AGGGCTCGCT GCTCGGCAAG ATGCCCGGCG ACAGGTGGCA GAAGTTCGCC
AACCTGCGCG CGTACTTCGG TTTCATGTGG ACGCATCCGG GCAAGAAGCT GCTGTTCATG
GGCGGCGAAT TCGGCCAGAT GGCGGAATTC GATCACGATA CGTCGCCGCA TTGGCATCTG
CTCGACGATT CGAACCATCA CGGCGTGCAA AAGCTGGTGC GCGACCTGAA CCGGCTGTAC
AGCGAGGAGC CCGCGCTGCA TCTGCTCGAT TGCGAGCCAG GCGGCTTCGA ATGGCTGATC
GGCGACGACA GCGGCAACAG CGTATTCGCC TATCGGCGCA CCGACGGCGC GGGCCGCGAA
GTGGTCGTGG TCTGCAATAT GACGCCGGTG CCGCGAGTCG GTTACCGGAT CGGCATGCCG
CGCGGCGGAC GCTGGTCGGA AGTGCTCAAT ACGGACGCCG GCGTGTACGG CGGCTCGAAC
ATGGGCAACG GCGGCCTGAT TCATACCGAC GAGCAATCGA GCCACGGCTG GCCGAATTCC
GCTTCGCTCA CGCTGCCGCC GCTTGCGACG ATCGTATTGC GCGCGGAGTA A
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| Protein sequence | MSEHDPAVGL QPLDIDALVE ARHPDPFSQL GMHQTDAGPV VRALLPNAAH VSVIARADGA
LLGELEQLRP GLFAGRVTTA APYRLRIDWH GVVQEIEDTY SFGPVLGDEP LGRLAGGDPY
AVLECLGAHP MEFEGVPGVR FAVWAPNARR VSVVGDFNAW DGRRHPMRLR HQAGVWELFV
PRVGPGTRYK YELLSRDGHP LPLKADPCAM QTEKPPGTAS IVAHVDEIEQ FPWTDHEWIQ
SRASKQTPRS PISIYEAHAE SWLRVAEQGQ RGLDWDELAE RMIPYVKSMG FTHVEFMPIA
EHPFGGSWGY QPLGQFAPSA RFGKPEQFAR FVDKAHEAGL GVILDWVPAH FPNDAHGLID
FDGTPLYEHA DPREGYHQDW NTMIYNLGRN EVSAFLVASG LAWLKRYHVD GLRVDAVASM
LYRDYSRAAG EWVPNIYGGR ENLESIAFLK RLNHEVGYVP GAPGAITIAE ESTAWPGVTA
RVEDGGLGFQ FKWNMGWMHD TLHYMEEDPV YRQYHHHNMT FGMVYAYSER FVLPLSHDEV
VHGKGSLLGK MPGDRWQKFA NLRAYFGFMW THPGKKLLFM GGEFGQMAEF DHDTSPHWHL
LDDSNHHGVQ KLVRDLNRLY SEEPALHLLD CEPGGFEWLI GDDSGNSVFA YRRTDGAGRE
VVVVCNMTPV PRVGYRIGMP RGGRWSEVLN TDAGVYGGSN MGNGGLIHTD EQSSHGWPNS
ASLTLPPLAT IVLRAE
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