Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6799 |
Symbol | |
ID | 6279864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3136346 |
End bp | 3137845 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617828 |
Product | Deoxyribodipyrimidine photo-lyase |
Protein accession | YP_001890464 |
Protein GI | 187921432 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000114492 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000135491 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACACGCG TCCGACGCTT GAACGACTCT TTCGACACCG GTCTGGTCTG GTTTCGCCGT GACCTGCGCA GCACGGACAA CGCCGCGCTC TACTACGCGC TCAAGCATTG CGAGCGCGTG TGGTGCGTAT TCGTGTTCGA CACGACGATC CTGCAACCGC TAGTCGAAGC CTGGCAGGCT CGCCATCCCG ATACGCAGCC GCAGGATCGC CGCATCGAGT TGATTCTTGG GGCGCTGGGC GAACTGGATG AAGCATTACG CGCCAATGGC GGCGGCCTGA TCGTGCTGTA CGGCGACCCC GCCGACCTGG TGCCGAAGCT CGCCGATGAA CTCGGCGTGG ACGCGGTTTT CGCGAATCAC GACTACGAAC CGGTCGCCAT CGCGCGCGAC GAGACAGTCC GCGAGACGCT CGCGGAAGCC GGGCGCCAGT GGCTAACGTT CAAGGATCAG GTGATTTTCG AGCGGGACGA GGTGCTCACC GGTCAGAACA AGCCGTTCAC GGTGTTCACG CCGTACAAGA ACGCCTGGCT CAAGCAACTG ACGGCCTTCG ATCTGAAGCC ATACCCGGTG GAAAGTTACA CGAAGCATCT GGCCGCGCCG CCGTCGAAGC TGGACCGCCG TTTACCCACG CTCGATCAAC TCGGCTTCGC GCCGAGCAAT CTCGCCGAAC TGGACCTGCC CGCCGGCATG AGCGGCGCGC AGCGTCTGCT CGACGACTTC GCGACGCGCA TCGACAGCTA CAAAGACCGG CGCGACTTTC CCGCCGCGAA GGGTCCGAGC TATCTGTCGA TCCATCTGCG CTTCGGCACG GTCTCGATCC GCACGCTCGC GCGCCTCGCC CACGAGATGT CGCTGCAACC CGACGGGGAA GGCTCGACGA CCTGGCTGTC GGAACTGATC TGGCGAGACT TCTACTTCAT GATCCTCGCG CATCATCCGC GGCTCGCGAA CGGCGCGTCG TTCAAGGAAG AGTACGACCA GCTGCGCTGG GAGCAAGGCC CGGAAGCCGA CGAGGCGTTT GCCGCGTGGT GCGACGGCCG CACCGGCTAC CCGCTCGTCG ACGCGGCGAT GCTGCAACTG AACCGCACCG GCTATATGCA CAACCGTCTG CGGATGGTGA CAGCGAGTTT TCTGGTGAAG GATCTGGGCG TGGACTGGCG ACTCGGCGAG CGGTACTTCG CCCAACAGTT GAACGACTTC GATTTCTCGG CGAACAACGG CGGCTGGCAA TGGGCGGCAT CGACGGGATG CGACGCGCAG CCTTACTTCC GGATCTTCAA TCCGATCACG CAGTCCGAAA AATTCGACGC CGAGGGTCGC TTTATCAAGC GTTATTTGCC CCAGCTCGCG AGGTTGCCGT CGAAGTGGAT TCACGCGCCG TGGCTGGCGG GCACGGAGCG GCTCGCGGAA TTCGGCGTGG TATTGGGCAA AGACTATCCG GCGCCGATCG TCGACCATGC CGAAGCGAGG GCGCGCACGC TGGCCCGATT CGGCAAGTGA
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Protein sequence | MTRVRRLNDS FDTGLVWFRR DLRSTDNAAL YYALKHCERV WCVFVFDTTI LQPLVEAWQA RHPDTQPQDR RIELILGALG ELDEALRANG GGLIVLYGDP ADLVPKLADE LGVDAVFANH DYEPVAIARD ETVRETLAEA GRQWLTFKDQ VIFERDEVLT GQNKPFTVFT PYKNAWLKQL TAFDLKPYPV ESYTKHLAAP PSKLDRRLPT LDQLGFAPSN LAELDLPAGM SGAQRLLDDF ATRIDSYKDR RDFPAAKGPS YLSIHLRFGT VSIRTLARLA HEMSLQPDGE GSTTWLSELI WRDFYFMILA HHPRLANGAS FKEEYDQLRW EQGPEADEAF AAWCDGRTGY PLVDAAMLQL NRTGYMHNRL RMVTASFLVK DLGVDWRLGE RYFAQQLNDF DFSANNGGWQ WAASTGCDAQ PYFRIFNPIT QSEKFDAEGR FIKRYLPQLA RLPSKWIHAP WLAGTERLAE FGVVLGKDYP APIVDHAEAR ARTLARFGK
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