| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6760 |
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| Symbol | |
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| ID | 6277904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3092938 |
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| End bp | 3093642 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617788 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_001890425 |
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| Protein GI | 187921393 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.321116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.293575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATT CCTCTCTCAG CGCGCGCGAC TTCCCGTCCC ATCCGCCTTA CGTCTACCCC
GGCTACGGTT CGTCGGTCAA ACGCGGCCCG ACGCTTCCGC TGATTCCGCT GAAGGAAAAG
CTGCGCGACC AGCGCGTGCC GGTCTACGGC ACCGACGACC TCGGCGCGCT CGATCACGAT
CTGACGCGTA ACGCCGTGCG TAACGGCGAA CCGCTCGGCG AGCGCATCAT CGTGACGGGC
CGTGTGCTCG ACGAAGGCAA CCGCCCGGTG CGCAACACGC TGGTCGAAAT CTGGCAAGCC
AATGCCGCCG GCCGCTATGT GCACAAGGCC GATCAGCACG ACGCGCCGCT CGACCCGAAT
TTCCTCGGCG CGGGGCGCTG CATCACGGAC AACGAAGGCC GCTATCGCTT CCTGACGATC
AAGCCGGGCG CGTATCCGTG GGGCAACCAT CCAAACGCGT GGCGTCCGAA CCATATCCAC
TTCTCGCTCT TCGGCGACCA TTTTGGCTCG CGCCTCGTCA CGCAGATGTA CTTCCCCGGC
GATCCGCTGC TGGCGTTCGA CCCGATCTTT CAGGGCACGC CGGAGCACGC CCGTGATCGC
CTGATCGCGG ATTTCTCGCT CGACACCACG CAAGAGGCCT ATGCGCTCGG CTACGACTTC
GACATCGTGC TGCGCGGCCG CAACGAAACT CCGATGGAGC GCTAA
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| Protein sequence | MDDSSLSARD FPSHPPYVYP GYGSSVKRGP TLPLIPLKEK LRDQRVPVYG TDDLGALDHD
LTRNAVRNGE PLGERIIVTG RVLDEGNRPV RNTLVEIWQA NAAGRYVHKA DQHDAPLDPN
FLGAGRCITD NEGRYRFLTI KPGAYPWGNH PNAWRPNHIH FSLFGDHFGS RLVTQMYFPG
DPLLAFDPIF QGTPEHARDR LIADFSLDTT QEAYALGYDF DIVLRGRNET PMER
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