Gene Bphyt_6754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6754 
Symbol 
ID6280328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand+ 
Start bp3084592 
End bp3085224 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID642617782 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001890419 
Protein GI187921387 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.36173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.846385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC ATCTCGCCAA ATCCGCCGAT CCGTCCATCA CCGACCTCGG CCGCCGCGTC 
CGCGCTGCCC GCCAGGCGCA GGACCTGACG CTGGAAACCG CCAGCCGCCT GTGCGGCGTG 
TCCCGCTCGA CGCTCTCGAA GGTCGAAAAC AGCCTGATGT CCCCCACTTT CGATGTGCTG 
CAGAAAATCG TCCTCGGACT GAAGATCGAA ATCGGCGAGT TGTTCGGCTC CACGCCAAAA 
GTCAGCGCCA GCGGCCGCCG CGCGCTGACC CGCAAAAACG AAGGCCAGCG CCACGCGTAT 
CGCGGCTACC AGATGGAACT GCTCGCCACC GACCTCGCGC ACAAGGCGAT GCTGCCGTTT 
CGTATCCGCA TCTCCGCGCA CACGCTCGAC GCCTTCGACG ACTGGGGCCG TCACGAAGGC 
GAGGAGTTTC TGTACGTGAT CAGCGGCAGC GTGTGCCTCT ATTCGGAGTT GTACGCGCCA 
ACGCATCTGA ACGCCGGCGA CAGTCTCTAC TTCGACAGCC GCACCGGTCA CGCAGCGGTC 
TCCACGAGCG AAGAAGACGC CGAAGTGTTG TGGATGGCGA CCAGCGCCGA CATTCCGCAA 
GCGCCGGCCA CCATCGAATC GACGAAGAAG TAA
 
Protein sequence
MDTHLAKSAD PSITDLGRRV RAARQAQDLT LETASRLCGV SRSTLSKVEN SLMSPTFDVL 
QKIVLGLKIE IGELFGSTPK VSASGRRALT RKNEGQRHAY RGYQMELLAT DLAHKAMLPF 
RIRISAHTLD AFDDWGRHEG EEFLYVISGS VCLYSELYAP THLNAGDSLY FDSRTGHAAV 
STSEEDAEVL WMATSADIPQ APATIESTKK