Gene Bphyt_6717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6717 
Symbol 
ID6278170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3039727 
End bp3040296 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content61% 
IMG OID642617746 
Productprotein of unknown function DUF204 
Protein accessionYP_001890383 
Protein GI187921351 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0704684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG TCGCCACGCT GTTCCTTGCT TTCGCCATGT CCACCGACGC CTTTGCGGCC 
GCAATCGGCA AGGGCGCCAC GCTCAATCGT CCTCATTGGC GCGAGGCTGT CAGGACGGGA
CTTATCTTCG GCGTCATCGA AGCACTCACG CCCCTGGTCG GATGGTTTCT CGGCAAAGCC
GCAGCGCAAT ACGTCTCGGC ATGGGATCAC TGGATCGCGT TTTCGCTGCT GTTGGTCCTC
GGTGCGCGCA TGGTTTTCAA CAGCTTCAAC ACCAAGGAAG TCGAGGAGAC GAAACCGTCG
GCTCATTCGT TCTGGTTGCT GGCGCTGACC GGCTTTGCCA CGAGTATCGA TGCGATGGCG
GTCGGTGCGG GTCTCGCTTT CGTGGACGTC AACATCTATT CCACTGCCGC CGCGATCGGT
CTCGCCACCA TGGCGATGGT CACGATCGGT GTGATGCTCG GCCGCGTCAT CGGGCATGTG
GCGGGCAGGC GCGCGGAACT GGCGGGCGGC ATCGTGCTGA TCGGCATTGG CAGCACGATC
CTGGCTGAAC ATCTGAACAT CTTCGGCTAG
 
Protein sequence
MNPVATLFLA FAMSTDAFAA AIGKGATLNR PHWREAVRTG LIFGVIEALT PLVGWFLGKA 
AAQYVSAWDH WIAFSLLLVL GARMVFNSFN TKEVEETKPS AHSFWLLALT GFATSIDAMA
VGAGLAFVDV NIYSTAAAIG LATMAMVTIG VMLGRVIGHV AGRRAELAGG IVLIGIGSTI
LAEHLNIFG