Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6594 |
Symbol | |
ID | 6280162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2897898 |
End bp | 2899094 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617627 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_001890264 |
Protein GI | 187921232 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.394989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.110882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACGT TCAATCCCGC ATTCGAAGCG CCGACCGGTT CGCCGATCCG CGAGCTCTTC AAGTATCTGG CGCAGCCCGG CATGATCTCG TTCGCCGGCG GCTATCCGGC GAGCGATCTG TTCGATCGTG AAGGGCTCGA CGCCGCTGCA TCGCGCGCGT CGCAACACGC TACCCTCTGC CTGCAATACG GCCCCACCGA CGGCCTCCCT GTCCTCAAAG AACAACTCGC GCACCTGATG GCGCGCCGCG GCGTGTCTTG CACGCCGCAA GACATGCTGG CGACGACCGG CTCGCAGCAA GGCTTCGATT TGCTGCTGCG CGTGATGGTC GCGCCCGGCG ACGTGGTGCT GGTCGAGCAG CCCGCTTATC CCGCGACCTT GCAGGCGCTC ACGCTGCAAG AGGCCGACGT GGTGACGATT CCGGTCGATC AGGACGGCCT CGATATCGAC GCGCTCGCCG CGCTGCTCGA CTCGGGCACG CTGCGCCGCG CGCCGAAGTT GTTGTACACG GTGCCCACGT TTGCAAATCC GACGGGCGCG ACCTTGTCGT TCGAACGCCG CACGGCGTTG CTGAAATTGG CAGCGCGTCA CCGCTTTCTG ATCGTCGAAG ACGATCCCTA CGGCGATCTG CGCTTCACTG GCGCCGCGTT GCCTTCGCTG CTTGCGCTGA GCGAACAGGT GCCGGGATCG CGCGACTGGG TCGTGCATTT CTCCAGTCTC TCGAAGATCG TCGCGCCGGG CTTGCGAGTG GGCTGGATGC TCGCGCACGC GGAGATTCTG CGACGCTGCG TGGTCGCCAA GCAGACGGTC GATCTATGCA GCTCGCCGTG GACCCAGGCG ATCGCCGCGG AGTATCTCGC GAGCGGCGCG CTGGAGCGGC ATTTGCCGCG CATCGTCGAC GCCTACGCCG TGAAATGCCG CACGCTATGC GACGCGCTCG AAGCGCAACT GGCGGAACAG ATCGCGTTTC ATCGTCCTGC CGGCGGCATG TTCGTATGGG CGCGATTGAA GGCCGGTCAG AATGCGTCCG ATTATCTGCG CGCTTGTATC GAGCGCAATG TGATGTTTGT GCCGGGCGTC GCTTTCTATA AAGACAATAT CGATTCGTCG GCACTGCGCT TGTCATTTGC CGCGCCTGGC ATAGCGGATA TCGAAACGGG CGTGCAGAGA ATGAAGCAGG CGCTCGAACA TTTTTGA
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Protein sequence | MFTFNPAFEA PTGSPIRELF KYLAQPGMIS FAGGYPASDL FDREGLDAAA SRASQHATLC LQYGPTDGLP VLKEQLAHLM ARRGVSCTPQ DMLATTGSQQ GFDLLLRVMV APGDVVLVEQ PAYPATLQAL TLQEADVVTI PVDQDGLDID ALAALLDSGT LRRAPKLLYT VPTFANPTGA TLSFERRTAL LKLAARHRFL IVEDDPYGDL RFTGAALPSL LALSEQVPGS RDWVVHFSSL SKIVAPGLRV GWMLAHAEIL RRCVVAKQTV DLCSSPWTQA IAAEYLASGA LERHLPRIVD AYAVKCRTLC DALEAQLAEQ IAFHRPAGGM FVWARLKAGQ NASDYLRACI ERNVMFVPGV AFYKDNIDSS ALRLSFAAPG IADIETGVQR MKQALEHF
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