| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6567 |
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| Symbol | |
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| ID | 6278972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2857824 |
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| End bp | 2859527 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642617594 |
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| Product | dihydroxyacetone kinase |
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| Protein accession | YP_001890237 |
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| Protein GI | 187921205 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2376] Dihydroxyacetone kinase |
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| TIGRFAM ID | [TIGR02361] dihydroxyacetone kinase, ATP-dependent
[TIGR02363] dihydroxyacetone kinase, DhaK subunit
[TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.264785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00376377 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGC TCATCAACGA GGTGTCCGCG GTCGTTCCGG ACATGCTCGA CGGACTCGCG
GCGCTCAATC CCAATCTCTC CCTGTTGCAA GGCGGCACGA TCGTCGTGCG CGCGGACGCC
GAGGCCGCCG CGGCGCGCGG TGAAGTCGCG CTGATCTCGG GCGGTGGCTC GGGCCACGAG
CCCGCGCATG GCGGCTATGT GGGCTCCGGC ATGCTGAGCG CGGCGGTCGC GGGTGAAGTC
TTCACGTCGC CGTCCACCGA CGCCGTGCTC GATGCGATCC GCGCGGTGGC CGGCGCCGCA
GGCGCATTGC TGATCGTGAA GAATTACACG GGCGACCGCT TCAACTTCGG CCTCGCGGCG
GAGATTGCGC GCGCCGAAGG CATTCCAACG GAAATGGTGA TCGTCGCCGA CGACGTCGCG
CTGACGGCAA GTGGCGATCA CGCGGGCCGT CGCGGGTTGG CAGGAACCGT ACTGATTCAC
AAGATAGCGG GCGCGGCTGC GGCAGCGGGG CGCCCGTTGG GGGAAGTCGC GCAGATCGCC
CGTGATGTGG CGGCCTCGCT CGGCACGATG GGTGTCGCGC TTACCGCGTG CACGGTGCCG
GCCGCGGGCA AGCCGGGCTT CGAACTGGCC GACGGCGAGA TTGAATGGGG ACTCGGCATT
CACGGCGAAC CGGGCGTGGA GCGCGGCGCG CTGGAACCCG CTGACGCGAT TGTCGAGAAA
CTGCTGGCGA AGATCGTCGG CGACCTGTCG TTGCAAACCG GTGAGCGTGT GGCGTTGCTG
GTGAACAATC TGGGCGGCAC GCCTTCGAGC GAATTGAGTA TCGTGGCCGG CTCCGCGCTG
CGTTATCTGG CGAAGCGCGG CATCGAGGTT GAACGCGCAT GGGCCGGCAC GTTCCTGAGC
GCGCTGGAAA TGGCCGGCGT CTCGCTGACG CTGCTGCGTG TGGACGACGA ACGGCTCGCA
TGGCTCGACG CCGCCACGCA TACCAGCGCG TGGCCCGCGC TGAGCGGCCG CGTCGCGCGG
GTTTCCGTGC GCCCTGCGCC GGCCGAGCCG GAGCGCGCAA GCGGTGCGAC GCTGTCGCGC
GAAGCGACCT TGCGCCGCGT GATCGAAGCC GTTTGCGCAT GCCTGCTGGA AGCCGAGCCC
ACGTTGACGG ACATGGATCA ACGCGTCGGC GACGGCGATC TCGGCATCAG TCTTTCGCGT
GGCGCCCGCG CGATCCTTCA CGAGCTCGAT GACTATCCGG CTGAAACAAC GCCCGCCGCC
GTACTGCGCA GCATGTCGGC GACGCTGCGG CGCGTGGTGG GCGGCACGTC GGGCCCGCTT
TACGCGGTGA TGCTGGTGCG CGCGGCAGTC GCGCTCGAAC AGTCAGGCGG ATCGACGCCG
AAAGAATGGG CGGTGGCGTT CAGCGCGGGT GTCGACGGTT TGATGGAACT GGGCGGTGCG
CATCCGGGCG ATCGCACCAT GGTCGATGCA TTGAAGCCGG CCGCCGACGC GCTGCAGTCC
GCTCTCGCAC GCCAGGATGC ACTGGATGCT GCGTTGCAAG CGGCCGTTGA CGCGGTGAGC
GCAGGCGCAT CGCAGACGGC GTCGATGCAT CCACGGCGTG GCCGTTCGAG TTATGTCGGC
GATCGCGCGC TAGGTCACGT GGATCCTGGC GCGCATGCGG TGGCGTTGTG GCTCGCCGCG
ATTCGCGAGG CGCTGGCGGC GTAG
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| Protein sequence | MKKLINEVSA VVPDMLDGLA ALNPNLSLLQ GGTIVVRADA EAAAARGEVA LISGGGSGHE
PAHGGYVGSG MLSAAVAGEV FTSPSTDAVL DAIRAVAGAA GALLIVKNYT GDRFNFGLAA
EIARAEGIPT EMVIVADDVA LTASGDHAGR RGLAGTVLIH KIAGAAAAAG RPLGEVAQIA
RDVAASLGTM GVALTACTVP AAGKPGFELA DGEIEWGLGI HGEPGVERGA LEPADAIVEK
LLAKIVGDLS LQTGERVALL VNNLGGTPSS ELSIVAGSAL RYLAKRGIEV ERAWAGTFLS
ALEMAGVSLT LLRVDDERLA WLDAATHTSA WPALSGRVAR VSVRPAPAEP ERASGATLSR
EATLRRVIEA VCACLLEAEP TLTDMDQRVG DGDLGISLSR GARAILHELD DYPAETTPAA
VLRSMSATLR RVVGGTSGPL YAVMLVRAAV ALEQSGGSTP KEWAVAFSAG VDGLMELGGA
HPGDRTMVDA LKPAADALQS ALARQDALDA ALQAAVDAVS AGASQTASMH PRRGRSSYVG
DRALGHVDPG AHAVALWLAA IREALAA
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