| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6564 |
|---|
| Symbol | |
|---|
| ID | 6278513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2855519 |
|---|
| End bp | 2856586 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642617591 |
|---|
| Product | tRNA 2-selenouridine synthase |
|---|
| Protein accession | YP_001890234 |
|---|
| Protein GI | 187921202 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2603] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0745888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.00486619 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAACC TACTCGTCAG CCTCGAACAT GCCGGTGATT TCGACGAAAT CATCGATGTG
CGCACGCCTC TCGAGTTTGC GGAAGACCAT ATTCCGGGCG CGCTCAACGC GCCCGTGCTG
AGCAACGAAG AGCGCGTGCT GGTCGGCACG ACATACAAGC AGGTATCGCC GTTCGAAGCC
ACACGCATGG GCGCGGCGCT GGTCGCGCGC AATATCGCGC ATCATCTGGA GACGACGTTC
TCCGACCGGC CGCGCAACTG GCGGCCGCTG ATCTATTGCT GGCGCGGCGG CAAACGCTCG
GGTTCGGTCA CCATGCTGTT CAATATGATC GGCTGGCAGG CGCGCCAACT CGAAGGCGGC
TACAAGACCT ATCGGCGCGC CACGCTGGAC ACGCTCGTTA CCTTGCCGAA GGCCTTCTCC
TACATCGCGC TGGTCGGCCC GACCGGTAGC GGCAAGACGC GCCTGCTGGC GGCCCTGAAC
ACCGCGGGCG CGCAGACGCT GGATCTCGAA GCGCTGGCCG CGCATCGCGG CTCGTTGCTC
GGCGCCTGGG CCGGCGTGCC GCAGCCTTCG CAGAAGCGTT TCGATACGCT GCTCGTGAGC
GCACTGCGCA CGTTCGATCC GGCACGGCCG GTGTTCGTGG AAGCCGAGAG CCGGCGCATC
GGCTCCATCG CGCTGCCGCT CGCGCTGCTC GACACGTTTC ATCAGGGCCG CTGCGTCGAG
GTGATCTCGA ACCCCGAAGA TCGCGCGGCC TTCCTGCTGC ACGACTATGC CCATCTGTTC
GACGATCCCG AGTTGCTCAA GGGACAGTTG CAACGAATGA TCGGTTTGCA TAGCCGGGAA
CGTATCACGG GTTGGCAGCA GCTCGTCGAC GACAACCGGC GCGCCGACCT CGCGCACGAG
TTGATCGAGC GGCATTACGA TCCGGCGTAT GCGCGTAGCA GCCGTCAGCA TTTCGTTCAT
TTGGCGCGCG CATTGCAATG GAATTTCCGT CCCAACGACG CCGATGTCGT CGACCAGGCG
AAGGCACTGC TTGCCGAGCT CGACAGCAGC GCACTCGCTG TCGTCTGA
|
|---|
| Protein sequence | MKNLLVSLEH AGDFDEIIDV RTPLEFAEDH IPGALNAPVL SNEERVLVGT TYKQVSPFEA
TRMGAALVAR NIAHHLETTF SDRPRNWRPL IYCWRGGKRS GSVTMLFNMI GWQARQLEGG
YKTYRRATLD TLVTLPKAFS YIALVGPTGS GKTRLLAALN TAGAQTLDLE ALAAHRGSLL
GAWAGVPQPS QKRFDTLLVS ALRTFDPARP VFVEAESRRI GSIALPLALL DTFHQGRCVE
VISNPEDRAA FLLHDYAHLF DDPELLKGQL QRMIGLHSRE RITGWQQLVD DNRRADLAHE
LIERHYDPAY ARSSRQHFVH LARALQWNFR PNDADVVDQA KALLAELDSS ALAVV
|
|---|
| |