Gene Bphyt_6526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6526 
Symbol 
ID6280278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2813224 
End bp2814414 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content55% 
IMG OID642617558 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001890201 
Protein GI187921169 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.506561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAC ATGTTCAACC CTACGCAGGC GACCCAATTC TCGGGCTGAT GGAGACATTT 
GCCAAAGATG CCAACCCAAA GAAGGTGAAC CTTGGCGTCG GCATATATTA CGACGAGGAC
GGAAGAATCC CTGTCCTGCA CTCGGTGCGA CAAGCGGCGG CTAGCGTAAC GGCAAACGGT
GCGCCAGCTA CGTACTTGCC AATCGAGGGC GATGCTACTT ATAGGTCTCA GGTCGCGAGT
CTTCTTTTCG GCGAGGCGTC CCCGTCAGTG TTTCAGTCGT TGGCGACGGT GCAAACTATT
GGCGGCAGTG GAGCACTCAA AGTCGGCGCG GATTTCCTCA AGGTACATTT CCCCGAGAGC
GTAGTCTACG TTTCAAATCC TACCTGGGAC AATCACTTCG GAATCTTTGA GGGTGCCGGA
TTTTCAGTCG CTGCCTATCG CTACTATGAC CCAGCGACAA AAGGCCTCGA TTTTGATGGT
TTGCTCTTGG ACCTTGAGCA GACCAAGGCA AAGGACATCG TTCTGCTCCA TGCCTGTTGT
CACAACCCGA CAGGGGTTGA CCCGAGCCGA GCACAATGGA CGACGATTCT TGACTTGATT
GAGAAGCGCG GCCTGATTCC TTTTGTCGAC GCGGCCTATC AGGGCTTCGG TGATGGATTG
AACGAAGATG CGTTCGTCAT CCGTGAGCTC GCACGGCGCG GTTTGAACTT TCTGGTAAGT
AACTCCTTTT CGAAGAACTT CTCACTCTAC GGCGAGCGGT GCGGCACCTT GTTGGTCCAT
TGTGCTGTCG AAACCGAACG CGACAACGTT CTTGGTCGTG TCAAGCTCGC GGTTCGTCGC
AACTACTCAT CGCCGCCCAC ACACGGGATG CGATTGGTCA GCACTGTCTT GGGCGATGCA
TCTCTGCGAG CAGAGTGGAC TTCTGAGCTC GAGGCGATTC GTAGTCGCAT TGTTCAAATG
CGTCAACGAT TGCACGTTTC GCTCACAGAG GCATTGCCTT CCCGAAACTT CGACTACATC
GTCGAACAGA AGGGAATGTT CGCTTACACG GGGCTGAGCG AAAAGCAGGT CTTCGCCTTG
CGCGCCGACT ACGGAATTTA CGCGGTCTCC AGCGGAAGAA TCTGCATTGC CGGGCTGAAC
GCCGGTAACG TGGAATATGT GGCGAGAGGA CTGGTCGAGC TCATGCGCTA G
 
Protein sequence
MFAHVQPYAG DPILGLMETF AKDANPKKVN LGVGIYYDED GRIPVLHSVR QAAASVTANG 
APATYLPIEG DATYRSQVAS LLFGEASPSV FQSLATVQTI GGSGALKVGA DFLKVHFPES
VVYVSNPTWD NHFGIFEGAG FSVAAYRYYD PATKGLDFDG LLLDLEQTKA KDIVLLHACC
HNPTGVDPSR AQWTTILDLI EKRGLIPFVD AAYQGFGDGL NEDAFVIREL ARRGLNFLVS
NSFSKNFSLY GERCGTLLVH CAVETERDNV LGRVKLAVRR NYSSPPTHGM RLVSTVLGDA
SLRAEWTSEL EAIRSRIVQM RQRLHVSLTE ALPSRNFDYI VEQKGMFAYT GLSEKQVFAL
RADYGIYAVS SGRICIAGLN AGNVEYVARG LVELMR