Gene Bphyt_6505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6505 
Symbol 
ID6278141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2795704 
End bp2796048 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content63% 
IMG OID642617539 
Producttype IV secretory pathway VirB3 family protein 
Protein accessionYP_001890182 
Protein GI187921150 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3702] Type IV secretory pathway, VirB3 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA TCATGAATTC GCCTATTAGT CCACTTAGGG ATCCGGTCTT CAAGGGATGC 
ACGCGGCCCG CGATGCTCTG GGGTGTGCCG CTCGTGCCAT TCCTCATGGT CGGTGGCGGC
ATGCTGATTC CTGCCATCTG GGCATTGCTT GCCAGCCCAC CGCTCGGTGT TGGGCTCCTG
TTCCTGATGA TCCCAGTGTT CGTCGCCATG CGCGTTATCA CGCGCCGCGA CGACCAGCGT
CTCGCGCAGT ACGCACTGCG CCTGCGCATG GTCCTGCGGC AGGGCAATCG CCGCTTCTGG
GGTATGCACG CCTACACGCC GGTTCGCCTG AAGAGGAGGA CCTGA
 
Protein sequence
MNPIMNSPIS PLRDPVFKGC TRPAMLWGVP LVPFLMVGGG MLIPAIWALL ASPPLGVGLL 
FLMIPVFVAM RVITRRDDQR LAQYALRLRM VLRQGNRRFW GMHAYTPVRL KRRT