| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6503 |
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| Symbol | |
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| ID | 6278993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2792080 |
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| End bp | 2793240 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617537 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_001890180 |
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| Protein GI | 187921148 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCC TCTTTACCGC GGTTGGCGGC ACGCTCGAGA ACGGCATGTC GACCTACGTG
ACGAACGTCT CGTCGGCGCT GTCGGCCGCG CTCGTTCCCG TCGTAACGAC GGCTGTGACG
ATCTGGGTCA TCGCCTATGG TCTGGCGATC GTGCGGGGAG AGGCACACGA AGCCGTACCG
GCGTTTGCGT GGCGAGGACT GAAAGTGGCA GCCATCCTGG CTTTCGCGCT CGGCAGCGGT
ATCTACCAGC AGCAGGTCGT GGCCTCTGTC AGCGGTGCCA CGTCCGGCCT GGCACAGACG
ATCCAGAACG CGTCCAGCAC CACGGGCGGT GGCAACCCCG GATGTGGATC CGTCAGTGGC
AGCAGCGTGA CATCGGCCAG CGCCACCAGC ATCTACCAGA CGCTCGACTG CTATGACCAG
CAGATCGATC TCGTTCTGGA TGCCTATTCC GAAAAGGCGA CCCACGAGGG GCTTAGCCCG
AGCGGCCTGG CTGCCGCCAT TGGCGACATG GTGTGCGGGT TCGTGGCGGC GGTCGGCGGT
TCGATTTTCC TGATCGTGCT CGCGTTCGAA GTCGTGATGG GGCGCATGCT GCTCGACCTG
GTCCTCGGGA TCGGTCCGAT TTTCATCGCC TGTGCTGCCT TTGCGCCGAC CGTCCGTTTC
TTCGAAGCGT GGACGGCGAA AGTCGCGAAC TACGCATTGC TACAGGTACT GGTGGCCGCT
TTCCTGGGGA TGGCACTGAC GGCCTTCTCG ACTGAGCTCG CGCCTTTCCA GGTAACGACT
TCTCCGCCCG GCGCGAATGC GTCTGCTCTC GTGGCGGCCA GTCAGGCTGC GCTCGAAGCT
GCGTCGGCGT GGGGTGCGGC ACTCGGCATG TTTGCGACGG CGATTTTTCT GGCGATGGTT
GGCTGGCAAT TGCCATCAGT GGCGTCCGGC CTGTCAGGGG GGGCGACCGT GTCCGGCTTC
GGCGCGTTCG TGGCCGGTGT CGCCTCACGG CGCTTCGCAA CCGTGATCGG TCAGATGCTC
ACCCGCAGCG GGAATGGTCC GCGTCCTGGC GGCACGATCC GTGACCGGAC TGGCCCCGGC
GGCGGCTCGG GGAATTCATC GGGCGGCGCG GTGCCAGCTT ACCAGCGTGC CGCGCACGCC
AACCTGGGAC AGGGCAGTTG A
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| Protein sequence | MSGLFTAVGG TLENGMSTYV TNVSSALSAA LVPVVTTAVT IWVIAYGLAI VRGEAHEAVP
AFAWRGLKVA AILAFALGSG IYQQQVVASV SGATSGLAQT IQNASSTTGG GNPGCGSVSG
SSVTSASATS IYQTLDCYDQ QIDLVLDAYS EKATHEGLSP SGLAAAIGDM VCGFVAAVGG
SIFLIVLAFE VVMGRMLLDL VLGIGPIFIA CAAFAPTVRF FEAWTAKVAN YALLQVLVAA
FLGMALTAFS TELAPFQVTT SPPGANASAL VAASQAALEA ASAWGAALGM FATAIFLAMV
GWQLPSVASG LSGGATVSGF GAFVAGVASR RFATVIGQML TRSGNGPRPG GTIRDRTGPG
GGSGNSSGGA VPAYQRAAHA NLGQGS
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