Gene Bphyt_6461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6461 
Symbol 
ID6278983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2732882 
End bp2733655 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content55% 
IMG OID642617496 
ProductGntR domain protein 
Protein accessionYP_001890139 
Protein GI187921107 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0712738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value5.16822e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGACA ATGTCCGACA ACTCGTGCAG CTCATTCATG AACGAGGCTT TGAGCCAGGC 
GACAAACTTC CTTCCGAGCG CGAGATGTCA GAGATGTTCG GCATGAGTCG GGGGGCATTG
CGCGAAGCGT TGATTCGTCT TGATACGTTA CGCATTGTCG ATGCGCGTCC GAAATCCGGC
ATTTACCTGC GTGCCGGCTC AGCCGACCGT AGCATTGAGG CGATGGTGCT GTTCGCTGAG
GCGGATGCGC CTTTGGCTCC GGACGAAGTA ATCCAAGCCG TCGAATTGCG GCGTCTGCTC
GAAACGCAAG CGGTTCGCCT AGCTTGTGAG CGGCGTACAG ACGATGACCT GGAGCGGCTC
TCCGGCATCG TGAAGCGTTG TGTCGCTGCG CGGGGCAACG GTGAAAAACT GGCAGGCCTG
GACGCGGAGT TTCATCTCGC AATCGTCGCA GCTACTCAGA ACGATGTGTT TGCGCGTTTC
ATCAACGTGT TTTATCTGAT GTCGAGAAAG CGTCGTGAAG TTTATTTTTC TTCTGATGAG
CATTGCCGGC AATCAGTTAG CGATCATCGT AAATTGCTGG CAGCGATCGC TGAACGCGAT
GTTGACAAGG CAGAAAATAT ACTACGGCAG CACATCAAGG GGGTCGACGT CTACTTCCGT
ACACTGTTTG CGGCGTCGCC GGACGACGGG GTGCCATCGT CTTCATCTGT GGTGAAGCGG
ACGAAGAAAA AGTCCGCGAC GCGCAAGTTG GTACCTGCTG ACGGGGTTGT ATAA
 
Protein sequence
MLDNVRQLVQ LIHERGFEPG DKLPSEREMS EMFGMSRGAL REALIRLDTL RIVDARPKSG 
IYLRAGSADR SIEAMVLFAE ADAPLAPDEV IQAVELRRLL ETQAVRLACE RRTDDDLERL
SGIVKRCVAA RGNGEKLAGL DAEFHLAIVA ATQNDVFARF INVFYLMSRK RREVYFSSDE
HCRQSVSDHR KLLAAIAERD VDKAENILRQ HIKGVDVYFR TLFAASPDDG VPSSSSVVKR
TKKKSATRKL VPADGVV