| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6436 |
|---|
| Symbol | |
|---|
| ID | 6279555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2705635 |
|---|
| End bp | 2707239 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642617473 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_001890116 |
|---|
| Protein GI | 187921084 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000466111 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGC GCAGACGCAA TTTTTATGGC TGGGGCTATG AAGGAGACGA GGTATCTCGC
GAAGAAATCC GCGAGTTCGA ACAAGCTTGG ACTCGCCTGC TAGGCGTTTC CGATTTTGAG
CCGGTGCCGT TTCCAACGGA AAATTCCATC AAATTGCGCG AGCCGCGTGT ATCCGTGCCT
GAGTCGCTGA AGTCGATTTG CTCGACTGGG CAGCATGATC GCCTGTACCA CACCTATGGT
GCATCGACGG TCGATGTCGC CAGAGCTATT CGGGGTGAAT TCAGGAATCC TCCGGATGTC
GTGGCCTATC CGCGAACCGA AGACGATATC GTCAGCTTAT ATCGGTGGTG TGAAGATGCG
TCCCTCGCAG CGGTTCCGTA CGGCGGTGGA ACTAGCGTCG TTGGTGGCGT CAATCCGCCA
ACGCATGATC GGTATCGAGG AACAGTCTCG ATCGATATGA AACATTTCGA CCGGGTTCTC
GAAGTTGATA TGAAATCACA GGCCGCGCGG ATTCAGGCGG GTGTGCTGGG GCCCCACCTT
GAGCAACAGC TCAAGCCGAC TGGTCTGACT TTGCGATTCT TTCTTCAGGC ATGGGAGTTT
TCGTCACTCG GTGGATGGAT TGCAACGCGT GCTGCCGGGC ACTTTGCTAC CGCTTACACA
CAGATTGACG ATCACATTGA AAGCCTTAAA GTTGTGACGC CGGCGGGCAA CATCGAGTCG
AAGCGTTTTC CTGTGTCAGG TGCAGGGCCT AACCCTGACC GAATGTTCCT TGGCTCCGAA
GGAGCTTTGG GCATCATCAC TGAGGCTTGG GTCAAGCTTC ATCGCCGCCC GATTTATCGC
AAGATGACCA GCGTCAGGTT TACCAGTTAT GACGATGCGG TCGAGGCAGT CCGAATTATC
TCGCAGTCGG GGCTTAATCC TGCCAACGCG AGGCTTGTCG AACGCGAGGA AGCGGCTTAT
ACCGGCTCTA GCGACGGTAG TTACGACATC TTGGTGCTGG GGTTCGAATC GGCGGATCAC
CCAGTCGACC CGTGGATGAA ACGCGCACTG GAAATCTGCG GTGATCACGG TGGTAGGTGG
GATGAGGCAG GGCTGGATGG TGACCATGGA AACTCCGACT CTGGCGCCAA AAGTTGGAGA
GACAAATTCC TCCGTGGGCC GGCACTGCGT GAGCACGCGA TCGCACGCGG TGTAATGAGG
GAAACGATGG AGACGGCAAT CACCTGGGAC CGTTTCGCTC AACTGCGCGA ACACGTCAAG
AAAGAAACAA ATCGCGCGAT CCGGGAGGTC ACAGGAAGAC CCGGTTCAGT CACCTGCCGA
TTCACCCACA TTTATCCCGA TGGCCCCGCG CCTTATTTCA CCTGGTTCGC TTACGGTGAC
AAAAGTCGAA TTCCCGAACA GTACATGGCG ATCAAGGCAA TCGCCGAACA GTCGATGGTC
GATGCCGGAG GCACGGTAAC ACATCACCAT GCACTGGGAC GCGATCACCG GCCATGGTAC
GACAAGGAAC GTCCTGAACT TTTCTGTACA GCCTTGAAGG CAGCGAAGAC GGCGTTTGAT
CCACATTCGA TCCTTAATCC CGGCGTGCTT TTCGATCCTT CATAG
|
|---|
| Protein sequence | MQERRRNFYG WGYEGDEVSR EEIREFEQAW TRLLGVSDFE PVPFPTENSI KLREPRVSVP
ESLKSICSTG QHDRLYHTYG ASTVDVARAI RGEFRNPPDV VAYPRTEDDI VSLYRWCEDA
SLAAVPYGGG TSVVGGVNPP THDRYRGTVS IDMKHFDRVL EVDMKSQAAR IQAGVLGPHL
EQQLKPTGLT LRFFLQAWEF SSLGGWIATR AAGHFATAYT QIDDHIESLK VVTPAGNIES
KRFPVSGAGP NPDRMFLGSE GALGIITEAW VKLHRRPIYR KMTSVRFTSY DDAVEAVRII
SQSGLNPANA RLVEREEAAY TGSSDGSYDI LVLGFESADH PVDPWMKRAL EICGDHGGRW
DEAGLDGDHG NSDSGAKSWR DKFLRGPALR EHAIARGVMR ETMETAITWD RFAQLREHVK
KETNRAIREV TGRPGSVTCR FTHIYPDGPA PYFTWFAYGD KSRIPEQYMA IKAIAEQSMV
DAGGTVTHHH ALGRDHRPWY DKERPELFCT ALKAAKTAFD PHSILNPGVL FDPS
|
|---|
| |