| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6425 |
|---|
| Symbol | |
|---|
| ID | 6278930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2693845 |
|---|
| End bp | 2695158 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642617466 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001890109 |
|---|
| Protein GI | 187921077 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.102177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC AATTCACTCG CCGCGATCTG TTGAAGCGAG CATCCGGCCT GCTGGCCGTC
ACCGCAGTAG GCGGATTGAC CGGCGTCCAG GCAGAAGCCG CGGAAGCCCC TCCTGCGCGT
AGTCGCGTGC TGGCGCACAA ACCGGCTTTT ACGCCGCTCG ACCTTGCTTT GCGGCAGGCT
GTCGACAACG GCACCGTCGC AGGTGTCGTC GCAATGGGCG CAACGCAGCG CGGCCTGATT
TACGAGGGCG CATCGGGCCA TGCCAATCCC CAGGCCGGTA CGGCGATGAC ACCCGACACG
GTGTTCTGGC TGTTATCCAT GACCAAGGCG ATCACGGCAA CAGCCTGCAT GCAACTCATC
GAGCAGGGCA AGATTCGGCT CGACCAGCCG GCCGGGGACA TTCTTCCGGA ACTGAAGTCG
CCGCAGGTGC TGGACGGTTT CGATGCAGCC GGACAGCCCA GACTGCGTCC GGCAAAAAAC
ACGCTCACCG TGCGTCATCT GCTGACTCAC ACATCGGGTT TCACGTACAG CATCTGGAGC
GAAAACCTGA GCCGGTACGA AAAGGTGACC GGCATGCCGG ATATCGGCTA CTCGATGAAC
GGTGCGTTCA AGGCGCCGCT GGAATTCGAG CCCGGTGAGC GCTGGCAGTA CGGCATCAGC
ATGGACTGGG TCGGCAAGCT GGTCGAGGCC GTGAGCGACC AGTCGCTGGA GGTGTATTTC
CGCGAACACA TTTTTGCGCC GCTCGGCATG AGCAATTCAG GGTTTCTGAT CAGTGGCGCG
CAGAAGCAGC GTGTAGCGAC GATGCACAAC CGGCAGGCCG ACGGATCTCT CAAGGCCGCG
CCGTTCGAGA TCAATCAGCG ACCCGAGTTC TTCATGGGCG GCGGCGGCGC ATTCAGCACA
CCGCGCGATT ACATGGCGCT GCTGCAGATG CTGATCAACG GCGGGACCTA TCGTGGCGAG
CGGATTCTGC GCGCTGACAC CGTAGCGGCA ATGTTCCAGA ACCACATCGG AGATCTTCCC
GTAACGGAGA TGAAGACGGC GCAGCCGGCG TGGTCCAACA GCTTCGACCA GTTTCCCGGC
ATGCCTCACA AGTGGGGACT CTCCTTCGAC ATCAACACGC AACCGGGTCC TCACGGCCGC
AGCGCGGGAA GCATTAGCTG GGCGGGACTG TTGAATAGCT ATTTCTGGGT CGATCCGGTC
AGGAAGGTGG CCGGCTCGCT GTTCACGCAG GTCCTGCCGT TCTATGACGC GCGTGTGGTC
GAGCTATACG GACAGTTCGA GCAAGGGCTG TATCACGGCC TGCAAGACGC CTGA
|
|---|
| Protein sequence | MTIQFTRRDL LKRASGLLAV TAVGGLTGVQ AEAAEAPPAR SRVLAHKPAF TPLDLALRQA
VDNGTVAGVV AMGATQRGLI YEGASGHANP QAGTAMTPDT VFWLLSMTKA ITATACMQLI
EQGKIRLDQP AGDILPELKS PQVLDGFDAA GQPRLRPAKN TLTVRHLLTH TSGFTYSIWS
ENLSRYEKVT GMPDIGYSMN GAFKAPLEFE PGERWQYGIS MDWVGKLVEA VSDQSLEVYF
REHIFAPLGM SNSGFLISGA QKQRVATMHN RQADGSLKAA PFEINQRPEF FMGGGGAFST
PRDYMALLQM LINGGTYRGE RILRADTVAA MFQNHIGDLP VTEMKTAQPA WSNSFDQFPG
MPHKWGLSFD INTQPGPHGR SAGSISWAGL LNSYFWVDPV RKVAGSLFTQ VLPFYDARVV
ELYGQFEQGL YHGLQDA
|
|---|
| |