Gene Bphyt_6415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6415 
Symbol 
ID6278025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2680555 
End bp2681268 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID642617457 
ProductABC transporter related 
Protein accessionYP_001890100 
Protein GI187921068 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.581107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TTCTGAAAAT CAAGGGCCTG CAGGTCAACT ATGGCGGCAT TCAGGCCGTC 
AAGAATGTCG ACATGGAAGT GAAGACCGGT GACCTGGTCA CGCTTATTGG CGCGAACGGA
GCGGGAAAGA CCACCACCAT GAAAGCCATC GCCGGTCTGA AACCGTACTC GGTTGGCGAT
ATCGAGTACA TGGGTGCATC TATCAAGGGG ATTCCAACTC ATGAGCTTTT AAAGCGCGGT
CTGGCGATGG TGCCGGAGGG CCGTGGCATA TTTGCGCGCA TGTCCATCAT CGAGAACATG
CAGATGGGTG CCTATCTGCG CGATGACCTG CACGGCGTAA AGAGGGACAT CGAGCGAATG
TTCGGATTTT TTCCGCGCCT CGAAGAACGT AAGCTGCAGT TCGCGGGGAC ATTGTCGGGC
GGAGAGCAGC AAATGCTGGC AATGGCGCGT GCCATTATCA GCAAGCCCAA GCTGCTTCTT
CTCGACGAAC CTTCGATGGG ACTCTCCCCG ATTATGGTCG AAAAGATTTT CGAAGTCGTG
CGTGAAGTGT CGCGCGAAGG CATCACGGTT CTGCTTGTGG AACAAAATGC GCGCCTCGCC
TTACAGGCAG CGTCTCGCGG TTACGTTATG GAGTCCGGCA CGGTAACGAT GTCGGGCGAC
GCCAGCAAGA TGCTCGACGA CCCGAAGGTA CGCGCGGCCT ACCTCGGAGA GTAA
 
Protein sequence
MATILKIKGL QVNYGGIQAV KNVDMEVKTG DLVTLIGANG AGKTTTMKAI AGLKPYSVGD 
IEYMGASIKG IPTHELLKRG LAMVPEGRGI FARMSIIENM QMGAYLRDDL HGVKRDIERM
FGFFPRLEER KLQFAGTLSG GEQQMLAMAR AIISKPKLLL LDEPSMGLSP IMVEKIFEVV
REVSREGITV LLVEQNARLA LQAASRGYVM ESGTVTMSGD ASKMLDDPKV RAAYLGE