Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6415 |
Symbol | |
ID | 6278025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2680555 |
End bp | 2681268 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642617457 |
Product | ABC transporter related |
Protein accession | YP_001890100 |
Protein GI | 187921068 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.581107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCA TTCTGAAAAT CAAGGGCCTG CAGGTCAACT ATGGCGGCAT TCAGGCCGTC AAGAATGTCG ACATGGAAGT GAAGACCGGT GACCTGGTCA CGCTTATTGG CGCGAACGGA GCGGGAAAGA CCACCACCAT GAAAGCCATC GCCGGTCTGA AACCGTACTC GGTTGGCGAT ATCGAGTACA TGGGTGCATC TATCAAGGGG ATTCCAACTC ATGAGCTTTT AAAGCGCGGT CTGGCGATGG TGCCGGAGGG CCGTGGCATA TTTGCGCGCA TGTCCATCAT CGAGAACATG CAGATGGGTG CCTATCTGCG CGATGACCTG CACGGCGTAA AGAGGGACAT CGAGCGAATG TTCGGATTTT TTCCGCGCCT CGAAGAACGT AAGCTGCAGT TCGCGGGGAC ATTGTCGGGC GGAGAGCAGC AAATGCTGGC AATGGCGCGT GCCATTATCA GCAAGCCCAA GCTGCTTCTT CTCGACGAAC CTTCGATGGG ACTCTCCCCG ATTATGGTCG AAAAGATTTT CGAAGTCGTG CGTGAAGTGT CGCGCGAAGG CATCACGGTT CTGCTTGTGG AACAAAATGC GCGCCTCGCC TTACAGGCAG CGTCTCGCGG TTACGTTATG GAGTCCGGCA CGGTAACGAT GTCGGGCGAC GCCAGCAAGA TGCTCGACGA CCCGAAGGTA CGCGCGGCCT ACCTCGGAGA GTAA
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Protein sequence | MATILKIKGL QVNYGGIQAV KNVDMEVKTG DLVTLIGANG AGKTTTMKAI AGLKPYSVGD IEYMGASIKG IPTHELLKRG LAMVPEGRGI FARMSIIENM QMGAYLRDDL HGVKRDIERM FGFFPRLEER KLQFAGTLSG GEQQMLAMAR AIISKPKLLL LDEPSMGLSP IMVEKIFEVV REVSREGITV LLVEQNARLA LQAASRGYVM ESGTVTMSGD ASKMLDDPKV RAAYLGE
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