Gene Bphyt_6314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6314 
Symbol 
ID6279612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2580082 
End bp2580732 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID642617369 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001890012 
Protein GI187920980 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG TCCTGATTGC CGACGACCAC GCGCTGGTGC GCGACGGTCT GCGCCATATC 
CTGCAGGGCG CAAGCGGCTT CGAAGTCACC GGCGAAGCGA ACGATAGCGT CAGCACCGTC
GCGCTGATCC GCGAGCGGGC AGCCGACGTG CTGGTGCTCG ATCTGTCCAT GCCCGGCCGC
AACGGCGTCG AGTTGATCAA GCAGATCAGG GAAGAGAAGC CGGCGCTGCG CATTCTGGTG
CTGACCATGC ACGCCGAGCA GCAATACGCG GTGCGCGCGT TCAAAGCCGG CGCGTCCGGC
TACCTGACGA AGGAAAGCGC GAGCGCCGAA CTGGTGGCGG CCGTGACCAA GGTCGCCGCC
GGCGGGGTGT ACGTGAGCCT TACGATGGCC GAGCGGTTCG CGCAAAGCCT GAACGAACCG
ACCGATCTGC TGCCGCATCA GCGGCTATCG GATCGGGAAT TCGACGTCCT GAAGCGTATT
GCAGCCGGTC AAACGATCAC CGAGATCGCG GCCGAACTGT GTGTCAGCAG CAAGACGGTC
AGCACGTATA AGACGCGCAT CCTCGAAAAA ATGCAGATGC CGCACGAAGC GGCGCTGGTG
CGCTATGCGA TGCGCCATAA ACTGGTCAGC GACGAAGACG ACGGCATCTG A
 
Protein sequence
MTRVLIADDH ALVRDGLRHI LQGASGFEVT GEANDSVSTV ALIRERAADV LVLDLSMPGR 
NGVELIKQIR EEKPALRILV LTMHAEQQYA VRAFKAGASG YLTKESASAE LVAAVTKVAA
GGVYVSLTMA ERFAQSLNEP TDLLPHQRLS DREFDVLKRI AAGQTITEIA AELCVSSKTV
STYKTRILEK MQMPHEAALV RYAMRHKLVS DEDDGI