Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6314 |
Symbol | |
ID | 6279612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2580082 |
End bp | 2580732 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617369 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001890012 |
Protein GI | 187920980 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGCG TCCTGATTGC CGACGACCAC GCGCTGGTGC GCGACGGTCT GCGCCATATC CTGCAGGGCG CAAGCGGCTT CGAAGTCACC GGCGAAGCGA ACGATAGCGT CAGCACCGTC GCGCTGATCC GCGAGCGGGC AGCCGACGTG CTGGTGCTCG ATCTGTCCAT GCCCGGCCGC AACGGCGTCG AGTTGATCAA GCAGATCAGG GAAGAGAAGC CGGCGCTGCG CATTCTGGTG CTGACCATGC ACGCCGAGCA GCAATACGCG GTGCGCGCGT TCAAAGCCGG CGCGTCCGGC TACCTGACGA AGGAAAGCGC GAGCGCCGAA CTGGTGGCGG CCGTGACCAA GGTCGCCGCC GGCGGGGTGT ACGTGAGCCT TACGATGGCC GAGCGGTTCG CGCAAAGCCT GAACGAACCG ACCGATCTGC TGCCGCATCA GCGGCTATCG GATCGGGAAT TCGACGTCCT GAAGCGTATT GCAGCCGGTC AAACGATCAC CGAGATCGCG GCCGAACTGT GTGTCAGCAG CAAGACGGTC AGCACGTATA AGACGCGCAT CCTCGAAAAA ATGCAGATGC CGCACGAAGC GGCGCTGGTG CGCTATGCGA TGCGCCATAA ACTGGTCAGC GACGAAGACG ACGGCATCTG A
|
Protein sequence | MTRVLIADDH ALVRDGLRHI LQGASGFEVT GEANDSVSTV ALIRERAADV LVLDLSMPGR NGVELIKQIR EEKPALRILV LTMHAEQQYA VRAFKAGASG YLTKESASAE LVAAVTKVAA GGVYVSLTMA ERFAQSLNEP TDLLPHQRLS DREFDVLKRI AAGQTITEIA AELCVSSKTV STYKTRILEK MQMPHEAALV RYAMRHKLVS DEDDGI
|
| |