| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6299 |
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| Symbol | |
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| ID | 6277322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2562979 |
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| End bp | 2564088 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642617354 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001889997 |
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| Protein GI | 187920965 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAC AGACACTACC GGCGACGCTG CTCGCTATTA GCGGCATCGG CGGCATCGGC
CTGTCGGCCG GCGCGGCACA CGCACAGTCG AGCGTGACGC TGTATGGCAT CGCCGACGGT
GGTTTCACCT ACACCAGCAA TCAGGGCGGC AAGTCGAACT ATCAGGCGAC GGCCGGCAGC
GAACAGGGTT CGCGCTGGGG CCTGCTCGGC AGCGAAGATC TTGGCGGCGG CAACCGCGCA
GTATTCCGGC TCGAAAATGG CTTCAATCTG ATGAACGGCA CGGCCAGCGC GAATGGACGC
ATCTTCGGGC GACAAGCGTG GGTCGGTTTG TCGAGCGATC GCTACGGCAC GTTGACGTTC
GGCCGTCAGT ACAACGCGTC GCAGGATTCG CTGGAACCGC TGCAACTCGC CGCTGACACC
GTTCAGTACG GCACGCATCC ATTCGACGTC GACGATATCA ACAACACGTT TCGCACCGAC
AACTCGATCA AATACGTGAC GCCGACCTTC TACGGTCTGC AGATCAACAC CCTGTACGCG
CTGTCGGGAA ATGCCGGCAA TTTCGCGACG AACCGCTCGT ACAGCGTCGG CGCGAGCTAC
GCGAATGGCC CATGGCACCT CGGCGCGGCC TATGTGATGC TCGATCATCC CGCCACCGAC
ACCACCGGCG CGATTCCCTC CGACAACTAC TTCACTTTCC TGAAGGGCAT CAGCAAGCAG
CGCATTTACG GCGCGGGCGG ACTGTACGAC ATGGGCAACG CAAGCGTCGG CTTGATGTAC
ACCAACACGC GCTTCGAGCT GACACCCGCG AGCCAGTACC AGACCTACCA GAATGCCGAG
GCGAGCCTGC GCTATCGCAT TTCGCCGGCC GTGCATGCGG CGATCGGCGA GACCTATACG
AATGTATCGA CGAACGGAAA GGTGGACTCG TGGCACTACT GGCAGACGAC CGCAGGGGTT
CAGTACTTCC TGTCGAAATC GACCGATGTC TATATCGACT TGCTGTACCA GCGCGCCACG
AACGCGGTCG CGCAGATCGA GGGAGCATCC GGCCCGTCTA GCAGCGGCAC GCAGTTCATC
GCCGTCACGG GCATCCGGCA TAAGTTCTGA
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| Protein sequence | MRKQTLPATL LAISGIGGIG LSAGAAHAQS SVTLYGIADG GFTYTSNQGG KSNYQATAGS
EQGSRWGLLG SEDLGGGNRA VFRLENGFNL MNGTASANGR IFGRQAWVGL SSDRYGTLTF
GRQYNASQDS LEPLQLAADT VQYGTHPFDV DDINNTFRTD NSIKYVTPTF YGLQINTLYA
LSGNAGNFAT NRSYSVGASY ANGPWHLGAA YVMLDHPATD TTGAIPSDNY FTFLKGISKQ
RIYGAGGLYD MGNASVGLMY TNTRFELTPA SQYQTYQNAE ASLRYRISPA VHAAIGETYT
NVSTNGKVDS WHYWQTTAGV QYFLSKSTDV YIDLLYQRAT NAVAQIEGAS GPSSSGTQFI
AVTGIRHKF
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