Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6216 |
Symbol | |
ID | 6278892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2468534 |
End bp | 2469283 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617271 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001889914 |
Protein GI | 187920882 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.468686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGCC CCACCACTTC GCTCGAGTTG CTCCGCTCCG TCACGCTGTC CGGTCTCGTG CAAGAGGAAA TTCTCCGCCG CATCAAGACG GGTGAGCTCG AGGCCGGCAT GAAACTCAAC GAGATGGATC TCGCCGACCA TCTGAAGATC AGCCGCAGTC CGGTGCGCGA AGCGTTTCGC GCGCTCGAGG AAGCGGGTCT CGTGTGGCTC GAAAAGAACC GCGGCGTCTA CATCCGTGAG ATTTCCGACG ACGAAGCCGC CGAGCTCTAC GAAGTGCGCG CCGGCCTCGA CGAGATGGCC GGCCGCCGCC TGGCCTCGAA GATCACCGAC GCGCAGTTGC AAGAACTGCA CGCCATGCTC GATCAGCTCG AAGCCAGCTC GATCCACGGC GAGCTGAACA ATTACTTCAC GCTGAATATC GCCTTTCACG ACCGGCTGGT CGAACTGTCG GGCAACGCGA CGATGCTCGG TCTGTACCGG CAAACGATCA ACCGCATGCA TCTGCTGCGC CGGCGCGGCT TTTCGATCGC CGGCAGCTCG CAGGCGTCGC ACACCGAACA CCGCCTGATT CTCGACGCGC TCGCGAGCCG CGATCCCGAA GCCGTCGCCC TTGCCATGCG CCAGCACGTG CAGGCAGGTT TCCAGCGCGC GATCGCCGCA CATGGCGCGG AAGACGCCGC GCACGCGGCA GCGGGCAGCG CAGCCGCCGG CAAAGCGCCG CAGACCACCG TCGCGGAAGG TCCGAATTAA
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Protein sequence | MPRPTTSLEL LRSVTLSGLV QEEILRRIKT GELEAGMKLN EMDLADHLKI SRSPVREAFR ALEEAGLVWL EKNRGVYIRE ISDDEAAELY EVRAGLDEMA GRRLASKITD AQLQELHAML DQLEASSIHG ELNNYFTLNI AFHDRLVELS GNATMLGLYR QTINRMHLLR RRGFSIAGSS QASHTEHRLI LDALASRDPE AVALAMRQHV QAGFQRAIAA HGAEDAAHAA AGSAAAGKAP QTTVAEGPN
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