Gene Bphyt_6216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6216 
Symbol 
ID6278892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2468534 
End bp2469283 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID642617271 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001889914 
Protein GI187920882 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.468686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC CCACCACTTC GCTCGAGTTG CTCCGCTCCG TCACGCTGTC CGGTCTCGTG 
CAAGAGGAAA TTCTCCGCCG CATCAAGACG GGTGAGCTCG AGGCCGGCAT GAAACTCAAC
GAGATGGATC TCGCCGACCA TCTGAAGATC AGCCGCAGTC CGGTGCGCGA AGCGTTTCGC
GCGCTCGAGG AAGCGGGTCT CGTGTGGCTC GAAAAGAACC GCGGCGTCTA CATCCGTGAG
ATTTCCGACG ACGAAGCCGC CGAGCTCTAC GAAGTGCGCG CCGGCCTCGA CGAGATGGCC
GGCCGCCGCC TGGCCTCGAA GATCACCGAC GCGCAGTTGC AAGAACTGCA CGCCATGCTC
GATCAGCTCG AAGCCAGCTC GATCCACGGC GAGCTGAACA ATTACTTCAC GCTGAATATC
GCCTTTCACG ACCGGCTGGT CGAACTGTCG GGCAACGCGA CGATGCTCGG TCTGTACCGG
CAAACGATCA ACCGCATGCA TCTGCTGCGC CGGCGCGGCT TTTCGATCGC CGGCAGCTCG
CAGGCGTCGC ACACCGAACA CCGCCTGATT CTCGACGCGC TCGCGAGCCG CGATCCCGAA
GCCGTCGCCC TTGCCATGCG CCAGCACGTG CAGGCAGGTT TCCAGCGCGC GATCGCCGCA
CATGGCGCGG AAGACGCCGC GCACGCGGCA GCGGGCAGCG CAGCCGCCGG CAAAGCGCCG
CAGACCACCG TCGCGGAAGG TCCGAATTAA
 
Protein sequence
MPRPTTSLEL LRSVTLSGLV QEEILRRIKT GELEAGMKLN EMDLADHLKI SRSPVREAFR 
ALEEAGLVWL EKNRGVYIRE ISDDEAAELY EVRAGLDEMA GRRLASKITD AQLQELHAML
DQLEASSIHG ELNNYFTLNI AFHDRLVELS GNATMLGLYR QTINRMHLLR RRGFSIAGSS
QASHTEHRLI LDALASRDPE AVALAMRQHV QAGFQRAIAA HGAEDAAHAA AGSAAAGKAP
QTTVAEGPN