| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6212 |
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| Symbol | |
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| ID | 6279058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2463352 |
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| End bp | 2464521 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617267 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001889910 |
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| Protein GI | 187920878 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.324597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CGCTGTTTGC ATTATCGATA TTGGGCACCT TTGCTGCGAC CGTTCACGCG
CAGAGCTCGG TGACGCTGTA CGGCATTGTG GATGAAGGCG TGATGATCAA CACCAACGCG
AAGAACGTGG TGAAGGGCAA GAACGTGGGC GGCCGGCAAT TCTCGGTTGA TTCCAATGCG
GGCACGCAGG GCAGCCGCTG GGGCATCCGC GGCGCAGAAG ATCTGGGCGG CGGCCTGAAG
GCGATCTTCG TGCTGGAGTC AGGCATCAAC GTCAGCACGG GCGCGTTCGG GCAAGGCGGC
ACTGCATTCG GCCGGCAAGC CTATGTGGGC CTCGCCAGCA GCTCGTTCGG CTCCGTAACG
CTCGGCCGTC AGTACGACAG CATCAATGAC TACGTGGGCA ACTACGGCTA TGCCGCCGCA
TATGGCGGAT CGACGACAGA ACATCCGGGC GACCTCGACA ACGTCAACCA TACATTTCGC
GCGAACAGCA CGATCAAGTA CGCGAGCCCG AATTTCAACG GCCTGACTTT CGGCGGCACG
GTGAGTCTGG GCGGCGTGGC GGGTGAGATT TCGCAGTCGA GCGGATACAG CCTCGGTGCG
AACTACGGAC ACGGCCCGTT CGGGATTGGG GTCGCGTATG AACTGTTCAA GAATCCGTCG
GCGTTGGGCT CGCTTCTGAA CAGCAACGCG AACGCCGCGA CGTTCAATTC GCTGAACTCG
GGTTATCTCG GCACGAAGCC CGCCAACTCG CTGCAAATCA TTACGACGGG CGGCTCGTAC
GACTTCGGCC CGGCAAAGAT CGGCGCGGTG TATTCGAATA CCAAGTACAT GAATATCGGC
GCATTCGGTG GGGCGACCGC GACGCTCAAC AGCTATGAGT TGAACGCGCT CTATCGCTTC
ACGCCGGCGT TCTCTGTGTC GGGTGAATAC AACTACACGA AGGGCAATGC GGTGAGAGGC
GACCTCGGCG ACCAGAAGTA CAACCAGTTC TCGTTGCTGC TCGACTACGC GCTGTCCAAA
CGTACCGACG TTTATTTCCT CGGCACGTTC CAGACCGCGA GCGGCACCAG TTCCACGGGC
GCTGCGGCGG TTGCGGATAT CGGCGGTCTC GGCGATTCGT CGAACAATCA TCAGGCCGTG
GCGCGCGTCG CGATTCACCA CAAGTTCTAA
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| Protein sequence | MKKSLFALSI LGTFAATVHA QSSVTLYGIV DEGVMINTNA KNVVKGKNVG GRQFSVDSNA
GTQGSRWGIR GAEDLGGGLK AIFVLESGIN VSTGAFGQGG TAFGRQAYVG LASSSFGSVT
LGRQYDSIND YVGNYGYAAA YGGSTTEHPG DLDNVNHTFR ANSTIKYASP NFNGLTFGGT
VSLGGVAGEI SQSSGYSLGA NYGHGPFGIG VAYELFKNPS ALGSLLNSNA NAATFNSLNS
GYLGTKPANS LQIITTGGSY DFGPAKIGAV YSNTKYMNIG AFGGATATLN SYELNALYRF
TPAFSVSGEY NYTKGNAVRG DLGDQKYNQF SLLLDYALSK RTDVYFLGTF QTASGTSSTG
AAAVADIGGL GDSSNNHQAV ARVAIHHKF
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