| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6211 |
|---|
| Symbol | |
|---|
| ID | 6277646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2461893 |
|---|
| End bp | 2463239 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642617266 |
|---|
| Product | Gluconate 2-dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001889909 |
|---|
| Protein GI | 187920877 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.783844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCC AATTCGATCG CTTGAAACAG TATCTGATTC CTGTGTTTGC GCTGATGTGC
AGCGGCGCGC TCAGTAGCGG TGCGAATGCG CAAACCTCGA ATGCCACGCC CACGCCCGTG
AGCGCCGACG CGCAGCTAGC CAAAGGCGCT TATCTCGCGA AAGTCGGCGA TTGCGCGGCC
TGTCACACGG TAAACAAAGC GCAACCGTTC GCGGGCGGCC TGCCGCTCGC GACGCCTTTT
GGCACGCTGT ATTCAACCAA CATCACGCCG GACGCATCGA CTGGCATCGG CGGATATAGC
TACGCGGACT TTGCCACGGC GTTGCGTCAG GGTATCGCCA AAGACGGCCA TCGGCTGTAT
CCGGCAATGC CGTATCCGTC GTATGCAAAG ATCGACGACG CCGACATGCA TGCGCTTTAT
CGCTACTTCA TGCAAGGCGT CAAACCCATC GGGCAGCCAG ATCGCGCGTC CGAACTGCGG
TTTCCATTCA ACGTTCGCGC GCTGATGACC GTGTGGGATC GTTTGTATGC GCATGAGCAA
CTGCCCTATC AGGCAGATCC GCACCAGAGT GTGGAATGGA ATCGCGGCGC ATATCTGGTG
CAAGGGCTCG CGCATTGCGG CGCATGTCAT ACGCCGCACG GCATGCTCGG CCAGGAGAGC
GTGCTCGACG AGAAGGACAA CACCGCGTTC CTGTCCGGCA ATACGCTGGC GGGATGGTAT
GCGCCCAACC TGCGCGGACA TAAGACGCAA ACATCCGACA GCGACAATGT ATGGAGCAAA
GCCGACCTCG TCGCCTATCT GCGCAGCGGG CGTATGCATG ACGGGGTGGC ATTCGGCCCG
ATGACGGAAG TCGTCGACGA CAGCACGCAA TATCTGCACG ACGACGATCT GAACGCGATC
GCAACCTATC TGACGTCGCC ACCATTGCAA GCAGGCGCGA CGCCGCCGGC CCCGCAGCAA
ACCGGCCGCG CGGAACAGAC GGCTATCGCG CTCCGAGCCG GTCGCGTCGA TTCGTCCGGC
GCCCGTCTCT ATCTGGACAA TTGCGCGGCC TGCCACCGCA CGGATGGCAC CGGCGCAATG
CCGGCTTTCC CCAGCCTCAG GGGCAACGCA TCGGTGCTGA GCGGCGATCC GGCATCGCTG
ATTCATATCG TGTTGAGTGG CTCCCATATG CCATCCACCG CCGCGGCGCC GACGCCGCTC
GCCATGCCCG ACTTCGGCTG GCGTTTGACC GATCAGCAGG TAGCGGACCT ATTGAGCTTC
GTGCGAACCA GTTGGGGAAA TCGCGCGGCG GCCGTCACTG CTGGTGAAGT CGCCAAGGTT
CGCGGCGTGG CGCTCAGCGC GAAATAA
|
|---|
| Protein sequence | MTIQFDRLKQ YLIPVFALMC SGALSSGANA QTSNATPTPV SADAQLAKGA YLAKVGDCAA
CHTVNKAQPF AGGLPLATPF GTLYSTNITP DASTGIGGYS YADFATALRQ GIAKDGHRLY
PAMPYPSYAK IDDADMHALY RYFMQGVKPI GQPDRASELR FPFNVRALMT VWDRLYAHEQ
LPYQADPHQS VEWNRGAYLV QGLAHCGACH TPHGMLGQES VLDEKDNTAF LSGNTLAGWY
APNLRGHKTQ TSDSDNVWSK ADLVAYLRSG RMHDGVAFGP MTEVVDDSTQ YLHDDDLNAI
ATYLTSPPLQ AGATPPAPQQ TGRAEQTAIA LRAGRVDSSG ARLYLDNCAA CHRTDGTGAM
PAFPSLRGNA SVLSGDPASL IHIVLSGSHM PSTAAAPTPL AMPDFGWRLT DQQVADLLSF
VRTSWGNRAA AVTAGEVAKV RGVALSAK
|
|---|
| |