| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6193 |
|---|
| Symbol | |
|---|
| ID | 6277388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2444414 |
|---|
| End bp | 2447206 |
|---|
| Gene Length | 2793 bp |
|---|
| Protein Length | 930 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642617248 |
|---|
| Product | ATPase AAA-2 domain protein |
|---|
| Protein accession | YP_001889891 |
|---|
| Protein GI | 187920859 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.809707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCC TTTGCGAAAT CTGTAACGCC CGTCCCGCTG TCGCCCGTGT GACCGTTGTG
CAGAACGGCG AGCGGAAAAC TTTATCGATC TGCGATTACG ACTATCGGCA ATTAATGCGG
CACCAAAGCA TGGCGAACCC GTTCGACTCG CTGCTCGGAG GAGGCGGTCT GTCCCGCTTC
TTCGGCGGTC TTGGCGGCGC GGGCGCCGGC GCCGGCGCGG AAGATGATGA CGAAGAAGAA
TTGGCCGCGG AGTTGCCGCG CGAATCGGTC GACGCCACCG ACGCCTTCAG CGAGCAGACG
CTCGAATTGT TGCAGCGCGC GGCAGAGAAA GCGCACGAAC TCCAGCGAAA CGAACTTGAC
ACCGAACATC TGCTGTACGT ACTAGCGGAC AACGATGTCG GCACCGCGCT GCTGAAGGAA
CTCAAACTCT CGCCGCAGGA TATTAAAGGG TACATCGACC AGCATGCGCA GAAGGGAAAC
GCGAGCCCCG ATACGCCGAT GGACAAGATG ACCATCTCGC CGCGCATGAA GAAAGTGATC
CAGAGCGCGT TCCAGGCATC GCGCGATCTG GGTCATTCCT ACATCGGGCC CGAGCATCTG
CTCATCGGGC TTGCGGCGGT GCCGGACAGT ATTGCGGGCA CCTTGCTGAA GAAGTACGGC
GTGACACCGG AAGCGCTGCG GCAGAAAGTG GTGAAGGTAG TCGGCAAAGG CGCCGAGGAT
GGCCGCGTCG ACACGCCGAC CGGCACGCCC ACACTCGACA AGTTCGGCCG TGATCTCACG
GCTCTGGCGC GGCAGGGCAA GCTCGACCCG GTGCTGGGTC GTGCGCAGGA AATCGAAAGC
ACGATTGAAG TACTCGCGCG GCGCAGGAAG AACAATCCGG TGTTGATCGG CGAACCGGGG
GTCGGCAAGA CCGCGATCGT CGAAGGCCTG GCGCAGCGTA TCGTCAACGA CGAAGTTCCC
GAAAATCTGC GCGGCAAGCG GCTCGTCGAG GTCAATATCA ATTCGATGGT GGCGGGTGCG
AAGTATCGCG GCGAGTTCGA AGAACGCGCA AAAACGCTGA TCGACGAAGT GACGGCGAAG
AAAGACGAAC TGGTTCTATT CATCGACGAA TTGCACATGA TCGTGGGCGC AGGCCAGGGC
GGCGGCGAAG GCGGCCTCGA CGTCGCGAAC GTGCTCAAAC CGGCGCTGGC CCGTGGCGAA
CTCAGCCTGA TCGGCGCGAC GACGCTCAAC GAATACCAGA AGTACATCGA AAAAGACGCA
GCGCTCGAGC GGCGCTTTCA GCCGGTGCTG GTGCCCGAGC CGACCGTCGA GCAGACCATC
GTCATCTTGC GCGGTCTGCG CGACAAGCTC GAAGCGCATC ATCAGGTGAC CTTTGCGGAC
GATGCGTTCG TCGCCGCCGC GGAGATGTCG GACCGTTACA TCACATCGCG CTTTCTCCCC
GACAAAGCCA TCGACCTGAT CGACCAGGCT GCCGCGCGCG TGCGCATCGG CGCCACCTCG
CGCCCGGCCG ACATCCAGGA ACTCGAAGCC GAAATCGCCC AGCTCAAGCG CGAGCAGGAC
TATGCGTCCT CGCGCAAGCG CTACGACGAG GCGAAGAAGT TCGAGGAGCG TATCGGCGAA
AAGCAGTCGA AACTCGATGA GCAGATGGAG GCATGGCAGC GCAAGACCGG TTCGGAAACG
CTTGAAGTGA CGGTGGCGGC CATCGCCGAA GTAGTGTCGC GCCAAACCGG CATTCCGGTC
ACCGATCTGA CACAGGAGGA GCGTCAGAAA CTGCTGGACA TGGAGAACAA ACTGCGCGAG
CGCGTGGTTG GCCAGGACGA CGCGGTGCTT GCCGTGAGCG ACGCCGTGCG CCTGTCGCGC
GCCGGACTTG GCCAGGCGAA CCGGCCTATC GCGACCTTTC TGTTTCTCGG ACCGACCGGC
GTCGGCAAGA CCGAGCTCGC GAAGGCCCTG GCGGAAACCG TGTTCGGCGA TGAGCAGGCG
GTGATCCGTA TCGACATGTC GGAATATATG GAGCGTCACG CGGTGGCGCG GTTGATCGGC
GCGCCTCCGG GCTATGTCGG GTATGACGAG GGCGGCCAGT TGACCGAGCG CGTCCGGCGG
CGCCCGTACA GCGTGATCCT GCTCGACGAG ATCGAGAAAG CCCACGCGGA CGTGAGCAAC
GTGCTGCTCC AGGTATTCGA CGACGGCCGG CTGACCGACG GCAAGGGTCG CGTGGTGGAC
TTCAGCAACA CGATCATCAT CGCGACCAGC AATCTCGGCG CACACATCAT CATGGATAAC
CTCGAGAAGC TCGAGGCGGA CCAGTTGCCG GAGAAGAAGC TTCGCGAAGA ACTGATGGAT
GTGCTGAAGG GCCACTTCCG CCCGGAATTC CTTAATCGTA TCGACGAGGT GATCGTCTTC
CACGGGCTTT CTCGCGAGAA TATCCGCTCG ATCGTGCAGA TCCAGCTCGA ACGGGTCATA
CGCACGGCGG CGGCCCAGGA CATCACGCTC AAGATGGACG AGTCGATTCT CGACCATCTT
GCCGACGCCG GCTACCGGCC CGAGTTCGGT GCCCGCGAAC TGAAGCGGCA GATCCGCCAG
GAACTGGAAA CGCGGCTTGC CAAGGAGATT CTCGGCGGTA AGCTGAAATC GGGCGACAGT
GTCGAGGTCA GCTACGACAA GGACAGCGGC GAAGTGAAGT TCGTTCGCGA CGAGGCGCCG
CCGCCCAAGG CGAAGCGCGT CAATGGCCGG GCCAAGAAGA AGTCGTCCGA CGAAGTCGGC
AGCACCGAGT CCACGGAGGG CGCCGGGTCC TGA
|
|---|
| Protein sequence | MAALCEICNA RPAVARVTVV QNGERKTLSI CDYDYRQLMR HQSMANPFDS LLGGGGLSRF
FGGLGGAGAG AGAEDDDEEE LAAELPRESV DATDAFSEQT LELLQRAAEK AHELQRNELD
TEHLLYVLAD NDVGTALLKE LKLSPQDIKG YIDQHAQKGN ASPDTPMDKM TISPRMKKVI
QSAFQASRDL GHSYIGPEHL LIGLAAVPDS IAGTLLKKYG VTPEALRQKV VKVVGKGAED
GRVDTPTGTP TLDKFGRDLT ALARQGKLDP VLGRAQEIES TIEVLARRRK NNPVLIGEPG
VGKTAIVEGL AQRIVNDEVP ENLRGKRLVE VNINSMVAGA KYRGEFEERA KTLIDEVTAK
KDELVLFIDE LHMIVGAGQG GGEGGLDVAN VLKPALARGE LSLIGATTLN EYQKYIEKDA
ALERRFQPVL VPEPTVEQTI VILRGLRDKL EAHHQVTFAD DAFVAAAEMS DRYITSRFLP
DKAIDLIDQA AARVRIGATS RPADIQELEA EIAQLKREQD YASSRKRYDE AKKFEERIGE
KQSKLDEQME AWQRKTGSET LEVTVAAIAE VVSRQTGIPV TDLTQEERQK LLDMENKLRE
RVVGQDDAVL AVSDAVRLSR AGLGQANRPI ATFLFLGPTG VGKTELAKAL AETVFGDEQA
VIRIDMSEYM ERHAVARLIG APPGYVGYDE GGQLTERVRR RPYSVILLDE IEKAHADVSN
VLLQVFDDGR LTDGKGRVVD FSNTIIIATS NLGAHIIMDN LEKLEADQLP EKKLREELMD
VLKGHFRPEF LNRIDEVIVF HGLSRENIRS IVQIQLERVI RTAAAQDITL KMDESILDHL
ADAGYRPEFG ARELKRQIRQ ELETRLAKEI LGGKLKSGDS VEVSYDKDSG EVKFVRDEAP
PPKAKRVNGR AKKKSSDEVG STESTEGAGS
|
|---|
| |