Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6144 |
Symbol | |
ID | 6279317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2393594 |
End bp | 2394559 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617201 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001889844 |
Protein GI | 187920812 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.969752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATAAGA TCGTTTTTCT GGACCGCTCG ACCCTCGCGC CGCAGATCGT GTTGCGTGAA CTGCGCTTCG AGCATCAGTT GATCGAGCAC GATCGCACTA CGCCGGAGCA AGTGATCGAG CGACTGGCCG GCGCGTCGAT TGCGATTACC AACAAGGTGG CGCTGAGCGC CGAAGTGCTG GAGCAGTTGC CGCAGTTGAA GCTCGTCGCG GTGGCCGCGA CCGGCACGGA TTGCGTCGAC AAGGCGGCGG CTCAACGGCT CGGCATTGCG GTGAGCAATA TTCGCGGCTA CGCGATCAAC ACCGTGCCCG AGCATACCTT CGCGCTGATC CTCGCGCTGC GGCGCAATCT GGTCGCTTAT CGCGACGACG TGCTCGCCGG CGAGTGGCAG AAGTCCGGGC AGTTCTGTTT CTTCACACAC GCGATTCACG ATCTGGCCGG CGCGCGGCTC GGCATCATCG GCGAAGGGGT GCTGGGGCAG CGTGTGGCGG AACTCGGCAA AGCCTTCGGC ATGCAGCCGA TGTTCGCCGC GCACAAAGGA CGCGAAGGAC TCGGCCCGCT ATACACGCCA TGGGACGAAG TGCTCGCGAC GAGCGACATC ATCACCGTGC ACAGTCCGCT CACGCCGCAA ACGCGCAATA TGCTCGCCAT GCCCGAGTTT CGCGCGATGA AGCGCCGGCC GTTGATCATC AACACGGCGC GCGGCGGACT GGTGGATGAA GCCGCGCTAG TCCAGGCGCT CGACGAAGGA TTGATCAGCG GCGCGGGTTT CGACGTGACC GCAGGGGAGC CACCCGCCGA CGATAATCCG CTGTTGCGCG CCGCCGGCCG GCCGAATGTG ATTCTGACGC CGCACGTGGC GTGGGCGTCG GACGACGCGC AGCAGAGTCT CGCGAATCAG TTGATGGATA ACATCGAGAA CTTCGTCAAC GATACGCCGA TGAATCTGGT GAGCGGAGCG TATTGA
|
Protein sequence | MHKIVFLDRS TLAPQIVLRE LRFEHQLIEH DRTTPEQVIE RLAGASIAIT NKVALSAEVL EQLPQLKLVA VAATGTDCVD KAAAQRLGIA VSNIRGYAIN TVPEHTFALI LALRRNLVAY RDDVLAGEWQ KSGQFCFFTH AIHDLAGARL GIIGEGVLGQ RVAELGKAFG MQPMFAAHKG REGLGPLYTP WDEVLATSDI ITVHSPLTPQ TRNMLAMPEF RAMKRRPLII NTARGGLVDE AALVQALDEG LISGAGFDVT AGEPPADDNP LLRAAGRPNV ILTPHVAWAS DDAQQSLANQ LMDNIENFVN DTPMNLVSGA Y
|
| |