Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6135 |
Symbol | |
ID | 6277488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2380402 |
End bp | 2381319 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642617192 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001889835 |
Protein GI | 187920803 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAACG CCACACTGAC CGCCACCACC GCCCCGGCCG CACGATCCAA AGACTCGCTG GGATGCCTGT CGAACCAGCT CGGCCGCGAT CTCGAACTCG ACACCGGCGA GTTCAAGTTT TATCGCAAGT CCACCGTCGA CGACCAGGCC AGCGCGGTCG CCATGCACGG TTCCGATCGC GGCTTCCTGA TCGGCGTGTC GCTCAAGCCA GGCCACCGCC GGCGCATTTA CTCGGCGCAC CGCTGGACCA CCCACGACTT CAGCCAGGAT AGCGTCTATA TTCGCGACTT CGCGGACGAC TACAAAGCCG ATCTGCAACG CGGATTCGAT TTCGTGCTGA TCGAACTGTC GCGCGCTTTC ATCGCGAACG CCTGTTATGA GCGCAACGGT TCGAACGTGG CGCGTCTCGC CACGCTGGCA GGTCGCAACG ATCCAACGCT CGGCCACTTC GCGCAGATTC TCTCGCTCAC GCTGGATCGC AAGAGCGAGG CAAGCCCGCT CTTTGTCGAG CAGTTAGGCA TCGCCGTGGG CACACATCTG CTCGATCAAT ACGGCGACAC GGCGTGCTCG TCCTTCAGCA AGACCCGGCG CCTGTCGAGT TTGCAGGAAA CGCGCGCCAA AGACATGCTG CTCGCCAAGT CGCAAGGCAG TGTGTCGATC GAAGAAATCG CCAACGCATG CAACCTCTCG CGCAGCTACT TCATTCGCGC CTTTCGCGAA ACCACGCATC GCACGCCGCA TCAATGGCTG CTCGAGCAGC GCATCGACCG GGCTCGCGAT CTCCTGAGAA ATTCGGACTA TTCCCTTTCC CAAATCGCCA TTGCATGCGG TTTCTCCGAC CAGAGCCATT TCACGCGAAC CTTCTCGCAA CTGGTCGGCA CGCCGCCCGG CACATGGCGC AGACAGGCCG CCGGCTAA
|
Protein sequence | MLNATLTATT APAARSKDSL GCLSNQLGRD LELDTGEFKF YRKSTVDDQA SAVAMHGSDR GFLIGVSLKP GHRRRIYSAH RWTTHDFSQD SVYIRDFADD YKADLQRGFD FVLIELSRAF IANACYERNG SNVARLATLA GRNDPTLGHF AQILSLTLDR KSEASPLFVE QLGIAVGTHL LDQYGDTACS SFSKTRRLSS LQETRAKDML LAKSQGSVSI EEIANACNLS RSYFIRAFRE TTHRTPHQWL LEQRIDRARD LLRNSDYSLS QIAIACGFSD QSHFTRTFSQ LVGTPPGTWR RQAAG
|
| |