Gene Bphyt_6120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6120 
Symbol 
ID6279889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2361239 
End bp2362093 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID642617177 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001889820 
Protein GI187920788 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAT CGGGTAAAAG CGAGCCGGAA GTGGTCTGCT GGCGCGACGG CGCGCTCGAT 
GGCGCATGTC TCGCGAGCGC CCGTTACGGC AATCACAAGT TCGACCGGCA TCTGCACGAC
GAACTCGTCA TTGTCATGAC CGAAACCGGC GCGGGCCAAT GTCATACGCG CGCGGGCAGC
GAGGTTGCCG GCCCCGGCAG CGTGCTGGTT TTCGGGCCGG GCGAATACCA TAGCGGCGAG
GTCTGGGAAG GCCGCGAATG GATTTATCGC GCGATCTATC TGGACATGGA AGGGCTCGGC
GCGCTCAGCG CCGTCTTCTC GCCCGACGCT CGCAGCGACA AACCGCTGCT GATTCCGCCG
GGGCTGTATC AGGACCCGCA CCTCGCGGGT CTGCTGGTCA AGGCGCATGC GAGCCTGGAC
GAACAGCGCG CCGTGTCGCT GATGGAGCGT CAGGCGAACT GGTGGGCTGC GATGGGAATG
CTGGTCGGGC GCTATGGGCG CGCGGGTGAA GAGGCGGGAG AGCCCCGGCG CGAGGCGCGC
AAGATGGAGC AGGTGCGCGA GTACGTCGCC GCCAATTACG AGCGCGATAT CTCGGTCGAT
GAACTGGCGG AACTGGTGGG TTTGAGCCGT TACTACCTCA CGCGCGCATT CTGCAAGGAG
TTCGGGCTGC CGCCGCACGC CTACGCGACG CAAGTGAGGC TATTGGCGGC GAAGCGCATG
CTTGCCTCAG GGCAGAGCGC AGCGACGGCT GCGGCGGCAG TGGGCTTTTA CGATCAAAGC
CATCTCAACC GGCTGTTCAA GCGGGCTTAT GGGATCACGC CCGGGGCGTA TGCGGCGTTG
AAGCCGGGGC ATTAG
 
Protein sequence
METSGKSEPE VVCWRDGALD GACLASARYG NHKFDRHLHD ELVIVMTETG AGQCHTRAGS 
EVAGPGSVLV FGPGEYHSGE VWEGREWIYR AIYLDMEGLG ALSAVFSPDA RSDKPLLIPP
GLYQDPHLAG LLVKAHASLD EQRAVSLMER QANWWAAMGM LVGRYGRAGE EAGEPRREAR
KMEQVREYVA ANYERDISVD ELAELVGLSR YYLTRAFCKE FGLPPHAYAT QVRLLAAKRM
LASGQSAATA AAAVGFYDQS HLNRLFKRAY GITPGAYAAL KPGH