| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6068 |
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| Symbol | |
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| ID | 6279567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2304871 |
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| End bp | 2306454 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617128 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001889771 |
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| Protein GI | 187920739 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.115417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCG ATTCTGCTTT GCCATTCGAA AAAACCCTTA ACGCCTGGTT CAATCAAGCC
GAGGAGGCGC GTCTCGCAGG CGAGTTCGAC ACAGCCCGAA CGCTGCTCGA CCGGATCATC
GGGCAAGACC CCGCACATGC GGACGCGTTG TACACGTATG GGCTCGTTGC GCTTGCATCG
AATCAACTCG AGTCGGCCCA AAGCTGGGTG GAACGCGCGC TCGAAGTGCG TTCGGATCCG
GCGTATTACG GCACGTTGTG TATTGTCCAG ATCAAACTGC GTGACTATGC ACGCGCTTTG
CAAACGGCCG AGTGCGGGCT CGCGCTCGAA CCGGCGTCGC TGCCGCTTAA CTTCTTCATG
GCCGTCATCC TGCAAGTGCA GGGACGTTCC GACGATGCCG CCGTCGCCTA CCATCGCTTG
CTCGAACTCC GGCCGGACCA TCCGCAAGCG CTTGTTAATC TGGGCGTGGT CGTGAAGGAC
CTCGGCTCGC TGAGTGAGGC CGAGCGGCAT CTCAGGCAAG CCATCGCGCT CGCGCCGTCT
TACCTCGGCG CGCGCGCAAG CCTCAGTCAG GTCCTGTTGG CCGCCGGCCG TTATGAAGAA
GCCTGGCCGT ATTTCGAAGA CCGTTGGGCC AATTTCGTGG ATGCCGACGG GCGGCCCGCA
TCGGTGCGCC CGACACTGCC GCTGCCTCAA TGGAAAGGCG AGCGCCTCGA CATCGCGAGC
GCCAGCCAGG GAATGCCCGA ATACGGCGCG CGTCTGCTTG TCATTCCAGA GCAGGGTCAT
GGCGACAGCC TGCAGTTCGT GCGCTATCTG CCGATGGCGC TCGAACGTTT TGCGCGCGTC
GGCTATATAT GCCCGCCATC GCTGCGGCGC TTGTACGAAG AGTCTTTCGC GCATTTGCCG
GGCCTCATGA TGCTCGACGA CGGCCTATCC GACCTGAGCG ACTGGGACTG GCATTGCCCT
TTGATGTCAC TGCCAATGGC GTTCGGCACG CGGCTCGACA ACATTCCCGC CGCCACGTAC
CTGCATGCGG ATGCCGCCCG CTCGGCCTCA TGGCGCGCGC GGCTTGCCAT GTTGCCCGAT
GCCGGCTTGC CGCGTGTCGG TCTGGTGTGG GCCGGTGGCC ATTCAGGTCT GACCGAAGAC
CGGGCGCGTA GTTTGAATCC CGCGCAAGTC GCGCCATTGC TCGCGTTACC CAATGTGCGC
TGGATCAGCC TGCAAAAGAC GGATGACCCC GCGAAGCGCG CCGATGCCGT AACACACGCG
CCTTTGACGG ACTGGATGGA CGACGCGACG GACTTCGCTG ATACCGCCGC GCTGATCGAC
AACCTCGATC TCGTGATCTC CGTCGACACG TCGGTTGCAC ATCTGGCCGC GGCAATGGGC
AAGCCGGTGT GGCTGCTCAA CCGCTTCGCC GGGTGCTGGC GCTGGTTGCG CGATCGCGAC
GACAGCCCAT GGTATCCCAG CGTGCGGCTC TTCACGCAGT TGCAACGCGG CGACTGGGAC
GGCGTGCTCG AGCGAGTCGC CGAGGCTTTG CTCCACGCGA CCGGTGCAAC CTATAGGAAG
TCTTACCGAT CCTTTGTGCG TTAG
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| Protein sequence | MPTDSALPFE KTLNAWFNQA EEARLAGEFD TARTLLDRII GQDPAHADAL YTYGLVALAS
NQLESAQSWV ERALEVRSDP AYYGTLCIVQ IKLRDYARAL QTAECGLALE PASLPLNFFM
AVILQVQGRS DDAAVAYHRL LELRPDHPQA LVNLGVVVKD LGSLSEAERH LRQAIALAPS
YLGARASLSQ VLLAAGRYEE AWPYFEDRWA NFVDADGRPA SVRPTLPLPQ WKGERLDIAS
ASQGMPEYGA RLLVIPEQGH GDSLQFVRYL PMALERFARV GYICPPSLRR LYEESFAHLP
GLMMLDDGLS DLSDWDWHCP LMSLPMAFGT RLDNIPAATY LHADAARSAS WRARLAMLPD
AGLPRVGLVW AGGHSGLTED RARSLNPAQV APLLALPNVR WISLQKTDDP AKRADAVTHA
PLTDWMDDAT DFADTAALID NLDLVISVDT SVAHLAAAMG KPVWLLNRFA GCWRWLRDRD
DSPWYPSVRL FTQLQRGDWD GVLERVAEAL LHATGATYRK SYRSFVR
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