Gene Bphyt_6059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6059 
Symbol 
ID6278438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2295917 
End bp2297293 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content63% 
IMG OID642617119 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_001889762 
Protein GI187920730 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0839917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACA TACTCGTAGT CGACGATGAC GATGGCTTTC GTGAGGGGCT CGTCGAAACG 
CTGGTCGACC TTGGGCACTC GGTCGAGGAG GCGAGCTCCG GCGAACAGGC GCTGGGAATC
CTGACGAATG CCGCCGTTCC GTTCACCTGC ATGTTTCTCG ACTTCCGCCT GCCCGGCATG
GACGGGCTCG CTATACTCGA AGCATTGCAG ACAACCGTCC ACGGGCCGAC GCTGCCGGTT
GTCATGCTGA CCGGCTTTGC CTCGAGCGAC AACACGATAG GCGCGATGAC GTTAGGGGCC
TTCGACCATC TGACGAAGCC GGTCGGAAGA CAGGCGATAC AGTCGTTGCT CGAGCGTATC
GTCTCCTCGA CAGCGGCAGG CGCGACGTCC GACGAGCCAC TGCCTAAGTT CGCCGCTGAG
CCGGCGAGTA CAAAGCCCCG GTTGCTGGGT GTCAGCGAGA CGTTGCGCGA GGTGCAGAAG
CAGATCGGGC GCGCGGCATC ATCCGATGCA ACGGTCCTCT TGAGCGGCGA AACCGGTACA
GGAAAAGAGG TGGCGGCACA CGTGCTTCAC GATGCGTCGA AGCGCCGGGA TAAGCCGTTC
GTCGCGGTCA ACTGCGCCGC CATTCCTTCT GAACTGCTCG AGAGCGAACT GTTCGGGCAT
GTTAAAGGCG CCTTCACAGG GGCCTCAGCA GACCGCGCCG GATGTTTCGC CGCTGCCGAC
GGCGGCACGC TGCTGCTCGA CGAGGTCGGC GACATGCCGC TGCCGATGCA GGCCAAGCTG
TTGAGGGTCA TCCAGGAACG GCAAATTACT CCGCTAGGCT CGAGTCGCGT GATTCCTGTC
GATATCAGGC TCGTCGCGGC AACCCATCGC GACCTGAAGG CAATGGTCGA AGCAGGAGAG
TTCCGTGAGG ACCTGCTTTA CCGGCTCAAC ATTATCCCCA TCGAACTACC CCCTCTGCGC
GAGCGCCTGG CCGACATCCT TCCGCTTGCC GAACACTTTC TCGCCGAAGT CGCCATTCGC
CGGTCTCGCG GCATGCGGCT GTCCTCGCCG GCGCAACGTC TGCTGCTCGG TTACGCGTGG
CCGGGAAATG TCCGTGAACT CAGAAACGCA ATCGAGCGCG CGGGCGCACT GGCTCCGGGA
CCTTCGATTA CGGCAGAAGA CCTCGGGTTT CTGAACGCGA AACCGAACGA CGGCCAGCCG
CTTCTGAACG CAAGCTTCTT CGACATGTCA TTGCCGGGCG CCGTGGAAGC AGTCGAGCGG
GCCATGATTA GCCACGCGCT GAGACTCGCT GACAACAACC GCGCCGACGC GGCGCGCCGG
TTGGGCATTA GCCGCCAGAC GCTTTACGCG AAGCTGGCGG CGCTCAAGCT CGAATAA
 
Protein sequence
MAHILVVDDD DGFREGLVET LVDLGHSVEE ASSGEQALGI LTNAAVPFTC MFLDFRLPGM 
DGLAILEALQ TTVHGPTLPV VMLTGFASSD NTIGAMTLGA FDHLTKPVGR QAIQSLLERI
VSSTAAGATS DEPLPKFAAE PASTKPRLLG VSETLREVQK QIGRAASSDA TVLLSGETGT
GKEVAAHVLH DASKRRDKPF VAVNCAAIPS ELLESELFGH VKGAFTGASA DRAGCFAAAD
GGTLLLDEVG DMPLPMQAKL LRVIQERQIT PLGSSRVIPV DIRLVAATHR DLKAMVEAGE
FREDLLYRLN IIPIELPPLR ERLADILPLA EHFLAEVAIR RSRGMRLSSP AQRLLLGYAW
PGNVRELRNA IERAGALAPG PSITAEDLGF LNAKPNDGQP LLNASFFDMS LPGAVEAVER
AMISHALRLA DNNRADAARR LGISRQTLYA KLAALKLE