| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6036 |
|---|
| Symbol | |
|---|
| ID | 6277297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2267213 |
|---|
| End bp | 2268616 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642617096 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001889739 |
|---|
| Protein GI | 187920707 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.475953 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTA TCACCGAGCC GAGCGGGAAT TCAGGCTCCG CCCCTTTCTT TTCCAAACAG
GCCACCGTTG CGAAACCAGG TTTTTCGCGC TGGATGGTTC CGCCCGCGGC CCTTGCCGTC
CACCTCTGTA TTGGCCAGGC GTACGCCTTT TCCGTGTTCA ACGGTCCGCT GACCAAGGTC
ATCGGCATTA CGCAATCCAG CGCGGATGAC TGGTCGCTGA CCTCGCTCGG CTGGATCTTT
TCGCTGGCGA TCGTGTTCCT CGGTTTGTCG GCGGCCTTCG CCGGCAAGTG GCTCGAACGC
GTCGGCCCGC GCCGCACGAT GTTTACCGCC GCATGCTGCT TCGGCGGCGG CTTCCTGGTT
TCCGCGCTCG GCGTGTATCT GCATCAGATC GTGCTGCTCT ATCTGGGCTA CGGCGTGATC
GGCGGAATCG GACTGGGACT CGGCTACGTG TCGCCGGTGT CCACGCTGAT CCGCTGGTTC
CCGGACCGCC GCGGCATGGC GACCGGCATG GCGATCATGG GCTTCGGCGG TGGCGCGATG
ATCGCCGCGC CGCTGTCCGT GGCGTTGATG AACCACTTCC GCAGCGCGAC CAGCATCGGC
GTGGCCGAAA CGTTCGTCGT GCTCGGCATC GCCTACTTCA TCTCGATGAC GATCGGCGCG
CTCGCGATCC GCGTGCCGCC CGCGGACTGG AAGCCGGCCG GCTGGACGCC GAGCACCACC
GGCCAGAACA AGATGATCTC GCGCAATCAC GTGCATATCG ATCAGGCGCT GAAGACGCCG
CAGTTCTATC TGATCTGGCT CGTGCTGTTT CTGAACGTGA CCGCCGGCAT CGGCATTCTC
GGCCAGGCCT CGGTGATGAT TCAGGAGAGC TTCAAGGACA CGGTGACGGC AGCCGCTGCG
GCCGGCTTCG TCGGCCTGTT GTCGCTCTTC AACATGGGCG GCCGTTTCGT TTGGGCGTCG
GCGTCGGACT GGATCGGCCG TAAGAACACC TACTTCATCT TCTTCGCGCT CGGCGCGGTG
CTGTATTACC TCGTGCCGGG TTTCGCGGCG TCGGGTCATA TCGCCCTCTT CGTGCTTGCT
TACTGCGTGA TCCTGACGAT GTACGGCGGC GGCTTCTCCA CCGTGCCGGC CTATCTCGCC
GACATGTTCG GCACGGCGTT CGTCGGCGGT ATTCACGGGC GTCTGCTGAC GGCGTGGGCC
GCGGCGGGCG TCGCCGGTCC GGTGCTGGTG AACTACATTC GCGCCTATGA AGTCGCGCAG
GGCGTCGCCA AGGCGGACGC CTACACGATG ACCGTTCACA TCATGGCCGT GCTGCTGGTA
GTCGGCTTCA TCTGCAACCT GCTGATCAAG CGTGTGGACG ACAAGCACCA CATGTCCGAC
GCACAACTCG CCAAAGGCGC TTAA
|
|---|
| Protein sequence | MSSITEPSGN SGSAPFFSKQ ATVAKPGFSR WMVPPAALAV HLCIGQAYAF SVFNGPLTKV
IGITQSSADD WSLTSLGWIF SLAIVFLGLS AAFAGKWLER VGPRRTMFTA ACCFGGGFLV
SALGVYLHQI VLLYLGYGVI GGIGLGLGYV SPVSTLIRWF PDRRGMATGM AIMGFGGGAM
IAAPLSVALM NHFRSATSIG VAETFVVLGI AYFISMTIGA LAIRVPPADW KPAGWTPSTT
GQNKMISRNH VHIDQALKTP QFYLIWLVLF LNVTAGIGIL GQASVMIQES FKDTVTAAAA
AGFVGLLSLF NMGGRFVWAS ASDWIGRKNT YFIFFALGAV LYYLVPGFAA SGHIALFVLA
YCVILTMYGG GFSTVPAYLA DMFGTAFVGG IHGRLLTAWA AAGVAGPVLV NYIRAYEVAQ
GVAKADAYTM TVHIMAVLLV VGFICNLLIK RVDDKHHMSD AQLAKGA
|
|---|
| |