Gene Bphyt_6008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6008 
Symbol 
ID6279763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2237089 
End bp2237715 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID642617068 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001889711 
Protein GI187920679 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.435355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC TATCCACGTT AGGGACTTTC GTTGCGGTTG TTCTCGGGCT CTTTCTGATT 
CCGGGTCCGG CTGTGCTGCT GGTGTTGACG CGCACCGTGC ATGGCGGCCG TAAGGCAGGC
ATTCTCACTG GCCTCGGCAT TGCGGTTGGC GATTTCATTC ATACGCTGGG CGCGTCGGTC
GGTCTCTCGG CGCTGCTGAT GACTTCGGCG CTGGCCTTCA ACGCGGTCAA GTTCGTCGGC
GCCGCCTACC TGGTTTATCT GGGCGTTCGC GCGTTGCGCG AGAAACAGGC CGGCGCGCAC
ATGCCGGCCG TCGCGCCGGT GTCCGCCTCG AAAGCATTCT TTCAGGCCAT TCCCGCCGAA
GTATTGAATC CCAAGACCGC GCTGTTTTTT CTCGCGTTTC TGCCGCAGTT CGTGCGCCCC
GAACACGGTT CCACGTTTCT GCAGTTCACC ACGCTCGGGC TGATTTTTGT CGGCATGAGC
GCGCTCTATA CGACGCTGAT CGTGTTGACG ATTCGTCCGC TGGGCAAATT CGTCAAGCGT
CTGACGTGGC TGACGCGCTG GCAGAACAAG ATCATCGGCG TGCTGTTCAT TTCGCTTGGT
CTGCGCGTGG CCACGCAAAC GCGTTGA
 
Protein sequence
MLDLSTLGTF VAVVLGLFLI PGPAVLLVLT RTVHGGRKAG ILTGLGIAVG DFIHTLGASV 
GLSALLMTSA LAFNAVKFVG AAYLVYLGVR ALREKQAGAH MPAVAPVSAS KAFFQAIPAE
VLNPKTALFF LAFLPQFVRP EHGSTFLQFT TLGLIFVGMS ALYTTLIVLT IRPLGKFVKR
LTWLTRWQNK IIGVLFISLG LRVATQTR